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Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
Phosphatase PTP4A3 Promotes Triple-Negative Breast Cancer Growth and Predicts Poor Patient Survival
Petra den Hollander1, Kathryn Rawls1, Anna Tsimelzon2
1Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Abstract:
Triple-negative breast cancer (TNBC) has the worst prognosis of all breast cancers, and women diagnosed with TNBC currently lack targeted treatment options. To identify novel targets for TNBC, we evaluated phosphatase expression in breast tumors and characterized their contributions to in vitro and in vivo growth of TNBC. Using Affymetrix microarray analysis of 102 breast cancers, we identified 146 phosphatases that were significantly differentially expressed in TNBC compared with estrogen receptor (ER)-positive tumors. Of these, 19 phosphatases were upregulated (0.66-fold; FDR = 0.05) in TNBC compared with ER-positive breast cancers. We knocked down 17 overexpressed phosphatases in four triple-negative and four ER-positive breast cancer lines using specific siRNAs and found that depletion of six of these phosphatases significantly reduced growth and anchorage-independent growth of TNBC cells to a greater extent than ER-positive cell lines. Further analysis of the phosphatase PTP4A3 (also known as PRL-3) demonstrated its requirement for G1-S cell-cycle progression in all breast cancer cells, but PTP4A3 regulated apoptosis selectively in TNBC cells. In addition, PTP4A3 inhibition reduced the growth of TNBC tumors in vivo Moreover, in silico analysis revealed the PTP4A3 gene to be amplified in 29% of basal-like breast cancers, and high expression of PTP4A3 could serve as an independent prognostic indicator for worse overall survival. Collectively, these studies define the importance of phosphatase overexpression in TNBC and lay the foundation for the development of new targeted therapies directed against phosphatases or their respective signaling pathways for TNBC patients. Cancer Res; 76(7); 1942-53. ©2016 AACR.
Insights
Triple-negative breast cancer (TNBC) lacks targeted therapies. Researchers identified overexpressed phosphatases, including PTP4A3, crucial for TNBC growth and survival, suggesting new therapeutic targets.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Triple-negative breast cancer (TNBC) presents a significant clinical challenge due to its aggressive nature and limited targeted treatment options.
- Phosphatases play critical roles in cellular signaling, and their dysregulation is implicated in various cancers.
Purpose of the Study:
- To identify novel therapeutic targets for TNBC by investigating phosphatase expression and function.
- To characterize the role of specific phosphatases, particularly PTP4A3, in TNBC progression.
Main Methods:
- Microarray analysis of 102 breast cancers to identify differentially expressed phosphatases.
- siRNA-mediated knockdown of overexpressed phosphatases in TNBC and ER-positive breast cancer cell lines.
- In vitro assays for cell growth, anchorage-independent growth, and apoptosis.
- In vivo studies using TNBC xenograft models.
- In silico analysis of gene amplification and survival data.
Main Results:
- 146 phosphatases were differentially expressed in TNBC compared to ER-positive tumors, with 19 upregulated.
- Depletion of six phosphatases significantly inhibited TNBC cell growth and anchorage-independent growth.
- PTP4A3 (PRL-3) is essential for G1-S cell-cycle progression in all breast cancer cells but regulates apoptosis selectively in TNBC.
- PTP4A3 inhibition reduced TNBC tumor growth in vivo.
- PTP4A3 gene amplification was observed in 29% of basal-like breast cancers, and high PTP4A3 expression correlated with worse overall survival.
Conclusions:
- Phosphatase overexpression is a key feature of TNBC, highlighting phosphatases as potential therapeutic targets.
- PTP4A3 is a promising therapeutic target for TNBC, impacting cell-cycle progression and apoptosis.
- These findings provide a foundation for developing targeted therapies against phosphatases for TNBC patients.
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