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Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Oncogene and therapeutic target analyses in atypical fibroxanthomas and pleomorphic dermal sarcomas
Doris Helbig1, Michaela Angelika Ihle2, Katharina Pütz2
1Department of Dermatology, University Hospital Cologne, Cologne, Germany.
Background:
Until now, almost nothing is known about the tumorigenesis of atypical fibroxanthoma (AFX) and pleomorphic dermal sarcoma (PDS). Our hypothesis is that AFX is the non-infiltrating precursor lesion of PDS.
Materials And Methods:
We performed the world-wide most comprehensive immunohistochemical and mutational analysis in well-defined AFX (n=5) and PDS (n=5).
Results:
In NGS-based mutation analyses of selected regions by a 17 hotspot gene panel of 102 amplicons we could detect TP53 mutations in all PDS as well as in the only analyzed AFX and PDS of the same patient. Besides, we detected mutations in the CDKN2A, HRAS, KNSTRN and PIK3CA genes.Performing immunohistochemistry for CTNNB1, KIT, CDK4, c-MYC, CTLA-4, CCND1, EGFR, EPCAM, ERBB2, IMP3, INI-1, MKI67, MDM2, MET, p40, TP53, PD-L1 and SOX2 overexpression of TP53, CCND1 and CDK4 was seen in AFX as well as in PDS. IMP3 was upregulated in 2 AFX (weak staining) and 4 PDS (strong staining).FISH analyses for the genes FGFR1, FGFR2 and FGFR3 revealed negative results in all tumors.
Conclusions:
UV-induced TP53 mutations as well as CCND1/CDK4 changes seem to play essential roles in tumorigenesis of PDS. Furthermore, we found some more interesting mutated genes in other oncogene pathways (activating mutations of HRAS and PIK3CA). All AFX and PDS investigated immunohistochemically presented with similar oncogene expression profiles (TP53, CCND1, CDK4 overexpression) and the single case with an AFX and PDS showed complete identical TP53 and PIK3CA mutation profiles in both tumors. This reinforces our hypothesis that AFX is the non-infiltrating precursor lesion of PDS.
Insights
Atypical fibroxanthoma (AFX) may precede pleomorphic dermal sarcoma (PDS). Both tumor types share similar oncogene expression profiles and TP53 mutations, supporting AFX as a precursor lesion to PDS.
Area of Science:
- Dermatopathology
- Oncology
- Molecular Biology
Background:
- The tumorigenesis of atypical fibroxanthoma (AFX) and pleomorphic dermal sarcoma (PDS) remains largely unknown.
- A hypothesis suggests AFX is a non-infiltrating precursor to PDS.
Purpose of the Study:
- To investigate the molecular and immunohistochemical characteristics of AFX and PDS.
- To explore the potential precursor relationship between AFX and PDS.
Main Methods:
- Comprehensive immunohistochemical and mutational analysis of AFX (n=5) and PDS (n=5) samples.
- Next-generation sequencing (NGS) using a 17-hotspot gene panel.
- Fluorescence in situ hybridization (FISH) for specific gene alterations.
Main Results:
- TP53 mutations were detected in all PDS and the single analyzed AFX/PDS pair.
- Mutations in CDKN2A, HRAS, KNSTRN, and PIK3CA were also identified.
- Overexpression of TP53, CCND1, and CDK4 was observed in both AFX and PDS, with IMP3 upregulation in PDS.
Conclusions:
- UV-induced TP53 mutations and CCND1/CDK4 alterations are crucial in PDS tumorigenesis.
- Activating mutations in HRAS and PIK3CA were found in other oncogenic pathways.
- Shared molecular profiles and mutations between AFX and PDS support the hypothesis of AFX as a precursor lesion.
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