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Updated: Mar 24, 2026

Multiplexed Isothermal Amplification Based Diagnostic Platform to Detect Zika, Chikungunya, and Dengue 1
Published on: March 13, 2018
Performance of Dengue Diagnostic Tests in a Single-Specimen Diagnostic Algorithm.
Elizabeth A Hunsperger1, Jorge Muñoz-Jordán1, Manuela Beltran1
1Dengue Branch, Division of Vector-Borne Diseases, Centers for Diseases Control and Prevention (CDC), San Juan, Puerto Rico.
Early dengue virus (DENV) detection using molecular or NS1 antigen tests, combined with IgM antibody testing in a single serum sample, accurately diagnoses over 90% of dengue cases within the first 10 days of illness.
Area of Science:
- Virology
- Immunology
- Infectious Diseases
Background:
- Traditional dengue diagnosis relies on immunoglobulin M (IgM) seroconversion, often requiring paired specimens and delaying clinical management.
- The limited utility of seroconversion testing in early disease necessitates alternative diagnostic approaches.
- Dengue virus (DENV) viremia and IgM antibody presence during the febrile phase offer a window for single-specimen diagnosis.
Purpose of the Study:
- To evaluate the diagnostic performance of real-time reverse transcription polymerase chain reaction (RT-PCR), nonstructural protein 1 (NS1) antigen detection, and IgM antibody testing for dengue diagnosis using single serum specimens.
- To establish an effective diagnostic algorithm for dengue utilizing early febrile phase samples.
Main Methods:
- Analysis of 1234 archived paired serum specimens from laboratory-confirmed dengue cases (2005-2011).
- Testing included real-time RT-PCR for DENV serotypes 1-4, NS1 antigen ELISA, and anti-DENV IgM ELISA.
- Evaluation of diagnostic yield across different days of illness onset.
Main Results:
- Within 1-3 days of illness onset, RT-PCR detected 82%-69% and NS1 antigen detected 90%-84% of cases.
- Anti-DENV IgM ELISA detected only 5%-41% of cases during this early period.
- A combined diagnostic algorithm using these tests over the 10-day febrile phase achieved ≥90% case confirmation.
Conclusions:
- A single serum specimen collected within the first 10 days of illness can accurately diagnose dengue.
- Combining molecular (RT-PCR) or NS1 antigen tests with IgM antibody detection enhances diagnostic sensitivity.
- This approach enables accurate identification of both primary and secondary dengue infections, improving clinical case management.
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