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Updated: Mar 23, 2026

A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
Structure-Activity Relationship Studies of Mitogen Activated Protein Kinase Interacting Kinase (MNK) 1 and 2 and
Joseph Cherian1, Kassoum Nacro1, Zhi Ying Poh1
1Experimental Therapeutics Centre , 13 Biopolis Way, Nanos, Singapore 138669.
Abstract:
Clinically used BCR-ABL1 inhibitors for the treatment of chronic myeloid leukemia do not eliminate leukemic stem cells (LSC). It has been shown that MNK1 and 2 inhibitors prevent phosphorylation of eIF4E and eliminate the self-renewal capacity of LSCs. Herein, we describe the identification of novel dual MNK1 and 2 and BCR-ABL1 inhibitors, starting from the known kinase inhibitor 2. Initial structure-activity relationship studies resulted in compound 27 with loss of BCR-ABL1 inhibition. Further modification led to orally bioavailable dual MNK1 and 2 and BCR-ABL1 inhibitors 53 and 54, which are efficacious in a mouse xenograft model and also reduce the level of phosphorylated eukaryotic translation initiation factor 4E in the tumor tissues. Kinase selectivity of these compounds is also presented.
Insights
New dual inhibitors targeting MNK1/2 and BCR-ABL1 were developed to eliminate chronic myeloid leukemia stem cells. These compounds show efficacy in preclinical models by reducing self-renewal capacity and phosphorylated eIF4E levels.
Area of Science:
- Oncology
- Molecular Biology
- Medicinal Chemistry
Background:
- Current chronic myeloid leukemia (CML) treatments targeting BCR-ABL1 kinase do not eradicate leukemic stem cells (LSCs).
- MNK1 and MNK2 inhibitors show potential by inhibiting eIF4E phosphorylation and LSC self-renewal.
Purpose of the Study:
- To identify novel dual inhibitors targeting both MNK1/2 and BCR-ABL1.
- To develop orally bioavailable compounds with improved efficacy against LSCs.
Main Methods:
- Structure-activity relationship (SAR) studies were performed starting from a known kinase inhibitor.
- In vitro kinase inhibition assays and in vivo efficacy studies in a mouse xenograft model were conducted.
- Analysis of phosphorylated eukaryotic translation initiation factor 4E (p-eIF4E) levels in tumor tissues.
Main Results:
- Compound 27 showed initial promise but lost BCR-ABL1 inhibition.
- Orally bioavailable dual MNK1/2 and BCR-ABL1 inhibitors, compounds 53 and 54, were identified.
- Compounds 53 and 54 demonstrated efficacy in a mouse xenograft model and reduced p-eIF4E levels.
Conclusions:
- Novel dual MNK1/2 and BCR-ABL1 inhibitors were successfully developed.
- These compounds represent a promising therapeutic strategy for targeting LSCs in CML.
- Further investigation into kinase selectivity and therapeutic potential is warranted.
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