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Isolation and Chemical Characterization of Lipid A from Gram-negative Bacteria
Published on: September 16, 2013
Structural Basis of Lipid Targeting and Destruction by the Type V Secretion System of Pseudomonas aeruginosa
Paulo Vinicius da Mata Madeira1, Samira Zouhir1, Pauline Basso2
1Brazilian National Laboratory for Biosciences (LNBio), CNPEM, Campinas, São Paulo, Brazil.
Abstract:
The type V secretion system is a macromolecular machine employed by a number of bacteria to secrete virulence factors into the environment. The human pathogen Pseudomonas aeruginosa employs the newly described type Vd secretion system to secrete a soluble variant of PlpD, a lipase of the patatin-like family synthesized as a single macromolecule that also carries a polypeptide transport-associated domain and a 16-stranded β-barrel. Here we report the crystal structure of the secreted form of PlpD in its biologically active state. PlpD displays a classical lipase α/β hydrolase fold with a catalytic site located within a highly hydrophobic channel that entraps a lipidic molecule. The active site is covered by a flexible lid, as in other lipases, indicating that this region in PlpD must modify its conformation in order for catalysis at the water-lipid interface to occur. PlpD displays phospholipase A1 activity and is able to recognize a number of phosphatidylinositols and other phosphatidyl analogs. PlpD is the first example of an active phospholipase secreted through the type V secretion system, for which there are more than 200 homologs, revealing details of the lipid destruction arsenal expressed by P. aeruginosa in order to establish infection.
Insights
Pseudomonas aeruginosa uses a type Vd secretion system to release PlpD, a lipase. This study reveals the crystal structure of active PlpD, showing its phospholipase A1 activity crucial for bacterial infection.
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- The type V secretion system is a bacterial macromolecular machine for secreting virulence factors.
- Pseudomonas aeruginosa utilizes the type Vd secretion system to secrete PlpD, a lipase with a unique structure.
Purpose of the Study:
- To determine the crystal structure of the secreted, biologically active form of PlpD.
- To elucidate the enzymatic activity and substrate specificity of PlpD.
Main Methods:
- X-ray crystallography to obtain the 3D structure of PlpD.
- Enzymatic assays to determine phospholipase A1 activity and substrate recognition.
Main Results:
- The crystal structure reveals PlpD possesses a classical lipase α/β hydrolase fold with a hydrophobic catalytic channel.
- A flexible lid covers the active site, suggesting conformational changes for water-lipid interface catalysis.
- PlpD exhibits phospholipase A1 activity and recognizes various phosphatidylinositols and analogs.
Conclusions:
- PlpD is the first active phospholipase identified secreted via the type V secretion system.
- The findings reveal a key component of the lipid-destroying arsenal used by Pseudomonas aeruginosa during infection.
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