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Detection of Rare Mutations in CtDNA Using Next Generation Sequencing
Published on: August 24, 2017
[Validation steps for the detection of L858R mutation in EGFR gene by real time quantitative PCR]
Emeline Saitta1, Astrid Brasselet1, Muriel Cadouot1
1Unité de biologie, Département de biologie et pathologie des tumeurs, Centre GF Leclerc, Dijon, France.
Abstract:
Since January 16(th) 2010, the French legislation requires that the medical laboratories must be accredited according to ISO 15189 standards. This concerned all the biological medical technics, including molecular biology technics. In this work, we described the validation steps by real time quantitative PCR of L858R mutation in EGFR gene, frequently detected in non-small lung cancers (NSCLC). Epidermal growth factor - tyrosine kinase inhibitors (EGFR-TKIs) are authorized in Europe for the treatment of metastatic NSCLC after failure of, at least one, prior chemotherapy. Thus, in view of accreditation of this analysis, we have used the recommendation of the COFRAC (Comité français d'accréditation) and INCa (Institut national du cancer). Several parameters have been tested, such as the primers, the limit of detection, and the sensitivity and specificity of the method. In addition, a risk study has been evaluated. Although long and fastidious, the method of validation is required to perform analysis in optimal conditions to guaranty optimal results for the patients.
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