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Published on: November 18, 2022
Analysis of single nucleotide polymorphisms implicate mTOR signalling in the development of new-onset diabetes after
S Chand1, A J McKnight2, S Shabir1
1Department of Nephrology and Kidney Transplantation, Queen Elizabeth Hospital, Birmingham B15 2WB, United Kingdom; Centre for Translational Inflammation Research, University of Birmingham, Birmingham B15 2WB, United Kingdom.
Introduction:
Despite excellent first year outcomes in kidney transplantation, there remain significant long-term complications related to new-onset diabetes after transplantation (NODAT). The purpose of this study was to validate the findings of previous investigations of candidate gene variants in patients undergoing a protocolised, contemporary immunosuppression regimen, using detailed serial biochemical testing to identify NODAT development.
Methods:
One hundred twelve live and deceased donor renal transplant recipients were prospectively followed-up for NODAT onset, biochemical testing at days 7, 90, and 365 after transplantation. Sixty-eight patients were included after exclusion for non-white ethnicity and pre-transplant diabetes. Literature review to identify candidate gene variants was undertaken as described previously.
Results:
Over 25% of patients developed NODAT. In an adjusted model for age, sex, BMI, and BMI change over 12 months, five out of the studied 37 single nucleotide polymorphisms (SNPs) were significantly associated with NODAT: rs16936667:PRDM14 OR 10.57;95% CI 1.8-63.0;p = 0.01, rs1801282:PPARG OR 8.5; 95% CI 1.4-52.7; p = 0.02, rs8192678:PPARGC1A OR 0.26; 95% CI 0.08-0.91; p = 0.03, rs2144908:HNF4A OR 7.0; 95% CI 1.1-45.0;p = 0.04 and rs2340721:ATF6 OR 0.21; 95%CI 0.04-1.0; p = 0.05.
Conclusion:
This study represents a replication study of candidate SNPs associated with developing NODAT and implicates mTOR as the central regulator via altered insulin sensitivity, pancreatic β cell, and mitochondrial survival and dysfunction as evidenced by the five SNPs.
General Significance:
1)Highlights the importance of careful biochemical phenotyping with oral glucose tolerance tests to diagnose NODAT in reducing time to diagnosis and missed cases.2)This alters potential genotype:phenotype association.3)The replication study generates the hypothesis that mTOR signalling pathway may be involved in NODAT development.
Insights
This study identified five gene variants associated with new-onset diabetes after transplantation (NODAT) in kidney transplant recipients. These findings suggest the mTOR signaling pathway may play a role in NODAT development.
Area of Science:
- Nephrology
- Transplantation immunology
- Medical genetics
Background:
- Long-term kidney transplant outcomes are impacted by new-onset diabetes after transplantation (NODAT).
- Contemporary immunosuppression regimens require validation of genetic associations with NODAT.
- Serial biochemical testing is crucial for accurate NODAT diagnosis.
Purpose of the Study:
- To validate candidate gene variants associated with NODAT development in kidney transplant recipients.
- To investigate the role of specific single nucleotide polymorphisms (SNPs) in NODAT.
- To identify potential genetic markers for NODAT risk.
Main Methods:
- Prospective follow-up of 112 kidney transplant recipients.
- Serial biochemical testing including oral glucose tolerance tests at 7, 90, and 365 days post-transplant.
- Analysis of 37 candidate gene variants (SNPs) in 68 eligible patients.
Main Results:
- Over 25% of patients developed NODAT.
- Five SNPs (rs16936667:PRDM14, rs1801282:PPARG, rs8192678:PPARGC1A, rs2144908:HNF4A, rs2340721:ATF6) were significantly associated with NODAT.
- Associations remained significant after adjusting for age, sex, BMI, and BMI change.
Conclusions:
- Replication study implicates specific SNPs in NODAT development.
- Findings suggest mTOR signaling pathway as a central regulator of NODAT.
- Highlights the importance of biochemical phenotyping for genotype-phenotype associations.
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