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Biotin-based Pulldown Assay to Validate mRNA Targets of Cellular miRNAs
Published on: June 12, 2018
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Cotranslational microRNA mediated messenger RNA destabilization.
Trinh To Tat1, Patricia A Maroney1, Sangpen Chamnongpol2
1Center for RNA Molecular Biology, Case Western Reserve University, Cleveland, United States.
Elife
|April 9, 2016
Summary
MicroRNAs (miRNAs) regulate gene expression by degrading messenger RNAs (mRNAs). This study reveals that miRNA-mediated mRNA decay occurs during translation, not after, solving a long-standing puzzle in molecular biology.
Area of Science:
- Molecular Biology
- Gene Regulation
- RNA Biology
Background:
- MicroRNAs (miRNAs) are small regulatory RNAs that reduce protein production by targeting messenger RNAs (mRNAs).
- mRNA degradation is typically thought to occur when mRNAs are not being translated (ribosome-free).
- However, miRNA-targeted mRNAs are consistently found associated with ribosomes during translation.
Purpose of the Study:
- To investigate the mechanism and timing of miRNA-mediated mRNA decay.
- To reconcile the observation of ribosome association with mRNA degradation.
Main Methods:
- Analysis of miRNA-targeted mRNA localization during translation.
- Investigating the initiation and progression of mRNA degradation pathways.
Main Results:
- Evidence demonstrates that the turnover of miRNA-targeted mRNAs occurs during the translation process.
- Cotranslational mRNA degradation is initiated by decapping.
- Degradation proceeds in a 5' to 3' direction, following the translating ribosome.
Conclusions:
- The findings explain how miRNA-targeted mRNAs can be degraded while associated with ribosomes.
- This study elucidates a novel mechanism of cotranslational mRNA degradation.
- Resolves a long-standing paradox in the field of miRNA research.
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