Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Mitochondrial Dysfunction in Ulcerative Colitis: Pathogenic Mechanisms and Novel Therapeutics.

Journal of biochemical and molecular toxicology·2026
Same author

A conceptual framework for pragmatic acceptance of healthcare robots among older adults: a computational grounded theory.

BMC medical ethics·2026
Same author

Immune cell phenotypes in the context of diabetic nephropathy: A Mendelian randomization analysis.

Medicine·2026
Same author

Corrigendum to "Collaborate Large and Small Language Models for Multi-Modal Emergency Rumor Detection" [Neural Networks 190, 2025, 107625].

Neural networks : the official journal of the International Neural Network Society·2026
Same author

ABCG2 Upregulation Involving AKT/NF-κB Signaling Contributes to Intestinal Barrier Dysfunction in Inflammatory Bowel Disease.

Digestive diseases and sciences·2026
Same author

Fluid shear stress enhances pancreatic cancer motility through YAP activation.

Clinical epigenetics·2026

Related Experiment Video

Updated: Mar 22, 2026

Experimental Design for Laser Microdissection RNA-Seq: Lessons from an Analysis of Maize Leaf Development
10:08

Experimental Design for Laser Microdissection RNA-Seq: Lessons from an Analysis of Maize Leaf Development

Published on: March 5, 2017

10.1K

Differential Gene Expression between Leaf and Rhizome in Atractylodes lancea: A Comparative Transcriptome Analysis.

Qianqian Huang1, Xiao Huang1, Juan Deng1

  • 1College of Pharmacy, Hubei University of Chinese Medicine Wuhan, China.

Frontiers in Plant Science
|April 12, 2016
PubMed
Summary

This study reveals key gene expression differences between Atractylodes lancea rhizomes and leaves, identifying crucial genes for rhizome development and Traditional Chinese Medicine applications.

Keywords:
Illumina sequencingdifferentially expressed generhizomatous plantsrhizome formationtissue-specific genestranscription factor

More Related Videos

Laser-Capture Microdissection RNA-Sequencing for Spatial and Temporal Tissue-Specific Gene Expression Analysis in Plants
08:33

Laser-Capture Microdissection RNA-Sequencing for Spatial and Temporal Tissue-Specific Gene Expression Analysis in Plants

Published on: August 5, 2020

8.9K
A Stepwise Guide to the Isolation and Analysis of Leaf Surface and Apoplastic RNA Using Arabidopsis Rosettes
09:56

A Stepwise Guide to the Isolation and Analysis of Leaf Surface and Apoplastic RNA Using Arabidopsis Rosettes

Published on: August 8, 2025

1.1K

Related Experiment Videos

Last Updated: Mar 22, 2026

Experimental Design for Laser Microdissection RNA-Seq: Lessons from an Analysis of Maize Leaf Development
10:08

Experimental Design for Laser Microdissection RNA-Seq: Lessons from an Analysis of Maize Leaf Development

Published on: March 5, 2017

10.1K
Laser-Capture Microdissection RNA-Sequencing for Spatial and Temporal Tissue-Specific Gene Expression Analysis in Plants
08:33

Laser-Capture Microdissection RNA-Sequencing for Spatial and Temporal Tissue-Specific Gene Expression Analysis in Plants

Published on: August 5, 2020

8.9K
A Stepwise Guide to the Isolation and Analysis of Leaf Surface and Apoplastic RNA Using Arabidopsis Rosettes
09:56

A Stepwise Guide to the Isolation and Analysis of Leaf Surface and Apoplastic RNA Using Arabidopsis Rosettes

Published on: August 8, 2025

1.1K

Area of Science:

  • Plant Molecular Biology
  • Genomics
  • Traditional Chinese Medicine

Background:

  • Atractylodes lancea rhizome is vital in Traditional Chinese Medicine.
  • Understanding its molecular basis for growth is essential.

Purpose of the Study:

  • Characterize transcriptome profiles of A. lancea rhizome and leaf.
  • Uncover molecular mechanisms of rhizome formation and growth.

Main Methods:

  • RNA sequencing and assembly of A. lancea rhizome and leaf.
  • Bioinformatic analysis of unigenes, gene expression, and transcription factors.
  • Differential gene expression analysis between tissues.

Main Results:

  • Assembled 92,366 unigenes; identified distinct gene expression patterns in rhizome vs. leaf.
  • Rhizome showed enrichment in stress response, transcription, translation, and metabolism genes.
  • Identified 104 candidate unigenes regulating rhizome development and 42 transcription factor families.

Conclusions:

  • Transcriptome profiling provides insights into A. lancea rhizome development.
  • Identified key genes and pathways involved in rhizome formation.
  • Data serves as a valuable resource for A. lancea functional genomics and breeding.