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Development of a cloud-based Bioinformatics Training Platform.

Jerico Revote, Nathan S Watson-Haigh, Steve Quenette

    Briefings in Bioinformatics
    |April 17, 2016
    PubMed
    Summary
    This summary is machine-generated.

    The Bioinformatics Training Platform (BTP) provides cloud-based computational infrastructure for hands-on bioinformatics training. This open-source resource supports next-generation sequencing education for researchers across Australia.

    Keywords:
    NGSbioinformaticscloudnext-generation sequencingtrainingworkshop

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    Area of Science:

    • Bioinformatics
    • Computational Biology
    • Genomics Training

    Background:

    • Bioinformatics training is crucial for researchers but often limited by computational infrastructure.
    • Next-generation sequencing (NGS) analysis requires specialized computational resources.
    • Dispersed researchers face challenges accessing consistent, cost-effective training solutions.

    Purpose of the Study:

    • To develop and deploy a cloud-based platform for delivering bioinformatics training.
    • To provide accessible computational infrastructure for hands-on bioinformatics courses.
    • To support the growing demand for NGS training among Australian researchers.

    Main Methods:

    • Developed a cloud-based Bioinformatics Training Platform (BTP).
    • Ensured compatibility with multiple cloud infrastructures for broad adoption.
    • Made the platform open-source and open-access.

    Main Results:

    • Successfully delivered 20 training workshops.
    • Trained over 700 researchers across more than 10 Australian venues.
    • The BTP is actively used for next-generation sequencing training.

    Conclusions:

    • The BTP offers an accessible, cost-effective solution for bioinformatics training.
    • The platform facilitates widespread access to essential computational resources for researchers.
    • The open-source nature of the BTP promotes its adoption and sustainability.