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Updated: Mar 22, 2026

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
Antibiotics, obesity and the link to microbes - what are we doing to our children?
1Department of Paediatrics, University of Turku and Turku University Hospital, Turku, Finland.
Insights
Early antibiotic exposure can disrupt the gut microbiota, potentially programming infants for obesity. This highlights the need for prudent antibiotic use and support for healthy microbial development in newborns.
Area of Science:
- Microbiome research
- Pediatric health
- Metabolic disorders
Background:
- Childhood obesity is a significant health challenge.
- Gut microbiota composition differs between obese and lean individuals.
- Microbial changes may precede and contribute to obesity development.
Discussion:
- Antibiotics severely impact the intestinal microbial community.
- Early or repeated antibiotic exposure in children is linked to increased overweight risk.
- Animal models show antibiotic-induced gut microbiota changes promote fat accumulation and an obesity-prone phenotype.
Key Insights:
- Perinatal antibiotic exposure can program a persistent obesity-prone metabolic phenotype.
- This programming occurs even after antibiotic discontinuation and microbiota recovery.
- These findings have significant clinical implications for neonatal antibiotic practices.
Outlook:
- Prudent antibiotic use is crucial to mitigate long-term metabolic consequences.
- Developing better methods to detect neonatal infections can reduce empirical antibiotic use.
- Strategies to support healthy microbial contact in infants undergoing antibiotic treatment are needed.
Background:
Childhood obesity and overweight are among the greatest health challenges in the pediatric population. Obese individuals exhibit marked differences in the composition of the intestinal microbial community as compared to lean subjects. These changes in the gut microbiota precede the clinical manifestation of overweight. Convincing experimental data suggest a causal role for intestinal microbes in the development of obesity and associated metabolic disorders.
Discussion:
Exposure to antibiotics exerts a devastating impact on the intestinal microbial community. Epidemiological studies have provided evidence indicating that early or repeated childhood exposure to antibiotics is associated with increased risk of overweight later in childhood but the causal role of this exposure in obesity development is not clear. However, data from studies conducted using experimental animal models indicate that antibiotic-induced changes in the gut microbiota influence host metabolism and lead to fat accumulation. The intestinal microbiota perturbation caused by antibiotic exposure in the perinatal period appears to program the host to an obesity-prone metabolic phenotype, which persists after the antibiotics have been discontinued and the gut microbiota has recovered. These observations may have serious implications in the clinical setting, since a substantial number of human infants are subjected to antibiotic treatment through the mother during delivery or directly in the immediate neonatal period. The clinical significance of these exposures remains unknown. Prudent use of antibiotics is paramount not only to reduce the propagation of antibiotic-resistant organisms but also to minimize the potentially detrimental long-term metabolic consequences of early antibiotic exposure. Improved means of reliably detecting neonates with bacterial infection would reduce the need for empirical antibiotic exposure initiated based on nonspecific symptoms and signs or risk factors. Finally, means to support healthy microbial contact in neonates and infants requiring antibiotic treatment are needed.
Related Concept Videos
Development of Human Microbiota
Introduction to the Human Microbiota
Clinical Significance of Antibiotic Resistance
Mechanism of Antibiotic Resistance in MRSA
Microbiota of the Respiratory Tract
Development of the Oral Microbiota

