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Updated: Mar 21, 2026

Analysis of Microglia and Monocyte-derived Macrophages from the Central Nervous System by Flow Cytometry
Published on: June 22, 2017
Origin, fate and dynamics of macrophages at central nervous system interfaces
Tobias Goldmann1, Peter Wieghofer1,2, Marta Joana Costa Jordão1,2
1Institute of Neuropathology, Freiburg University Medical Centre, Freiburg, Germany.
Abstract:
Perivascular, subdural meningeal and choroid plexus macrophages are non-parenchymal macrophages that mediate immune responses at brain boundaries. Although the origin of parenchymal microglia has recently been elucidated, much less is known about the precursors, the underlying transcriptional program and the dynamics of the other macrophages in the central nervous system (CNS). It was assumed that they have a high turnover from blood-borne monocytes. However, using parabiosis and fate-mapping approaches in mice, we found that CNS macrophages arose from hematopoietic precursors during embryonic development and established stable populations, with the notable exception of choroid plexus macrophages, which had dual origins and a shorter life span. The generation of CNS macrophages relied on the transcription factor PU.1, whereas the MYB, BATF3 and NR4A1 transcription factors were not required.
Insights
Central nervous system (CNS) macrophages originate from embryonic hematopoietic precursors, forming stable populations. Choroid plexus macrophages are an exception, with dual origins and shorter lifespans, requiring the PU.1 transcription factor.
Area of Science:
- Neuroimmunology
- Developmental Neuroscience
- Hematopoiesis
Background:
- Non-parenchymal macrophages, including perivascular, subdural meningeal, and choroid plexus macrophages, are crucial for immune responses at the brain's boundaries.
- While the origin of parenchymal microglia is understood, the precursors and dynamics of other CNS macrophages remain largely unknown.
- Previous assumptions suggested high turnover from blood-borne monocytes for these macrophages.
Purpose of the Study:
- To investigate the developmental origins and population dynamics of non-parenchymal macrophages in the central nervous system (CNS).
- To identify the key transcriptional regulators involved in the generation of CNS macrophages.
- To differentiate the origins and lifespans of various CNS macrophage populations.
Main Methods:
- Parabiosis experiments in mice to assess cell contribution and stability.
- Fate-mapping techniques to trace the developmental origins of macrophage populations.
- Analysis of transcription factor requirements for CNS macrophage generation.
Main Results:
- CNS macrophages originate from hematopoietic precursors during embryonic development and establish stable populations.
- Choroid plexus macrophages exhibit dual origins and a shorter lifespan compared to other CNS macrophages.
- The transcription factor PU.1 is essential for CNS macrophage generation, while MYB, BATF3, and NR4A1 are not required.
Conclusions:
- Non-parenchymal CNS macrophages are primarily derived from embryonic hematopoietic precursors, not blood monocytes.
- Choroid plexus macrophages represent a distinct population with unique developmental origins and turnover dynamics.
- PU.1 is a critical regulator for the development of CNS macrophages.
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