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Published on: November 19, 2015
Emergent Network Topology within the Respiratory Rhythm-Generating Kernel Evolved In Silico
Amit Lal1, Yoshitaka Oku2, Hiroshi Someya3
1Department of Biomedical Engineering, Peking University, Beijing, 100871 P. R. China.
The mammalian respiratory rhythm generator
Area of Science:
- Neuroscience
- Computational Biology
- Systems Biology
Background:
- The pre-Bötzinger Complex (preBötC) is the kernel for mammalian respiratory rhythm generation.
- Its network topology may be optimized for efficient and robust respiratory rhythm production.
- Understanding preBötC network structure is crucial for respiratory control research.
Purpose of the Study:
- To identify the synaptic connection topology within the preBötC.
- To investigate how network structure contributes to respiratory rhythm generation.
- To explore the role of inhibitory neurons in preBötC network dynamics.
Main Methods:
- Developed an evolutionary algorithm to optimize neuronal network topology.
- Created an in silico preBötC model with optimized synchronous population bursts.
- Analyzed network connectivity and compared evolved network with small-world (SW) networks.
Main Results:
- The evolved preBötC model exhibits skewed/heavy-tailed degree distribution in its excitatory subnetwork.
- Inhibitory neurons, particularly non-tonic pacemaker inhibitory neurons, significantly influence the excitatory subnetwork.
- The evolved network demonstrates superior performance in generating synchronous bursts compared to SW networks.
Conclusions:
- The preBötC network topology is optimized for efficient respiratory rhythm generation.
- Specific connectivity patterns and the role of inhibitory neurons are key to preBötC function.
- The evolved network provides a more accurate model for preBötC dynamics than traditional SW networks.
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