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Updated: Mar 21, 2026

Eukaryotic Polyribosome Profile Analysis
Published on: June 15, 2010
Factors impacting the aminoglycoside-induced UGA stop codon readthrough in selenoprotein translation
Janine Martitz1, Peter Josef Hofmann1, Jörg Johannes2
1Institut für Experimentelle Endokrinologie, Charité - Universitätsmedizin Berlin, Augustenburger Platz 1, D - 13353 Berlin, Germany.
Abstract:
Aminoglycosides (AG) are oligosaccharide antibiotics that interfere with the small ribosomal subunit in aerobic, Gram-negative bacteria, causing pathogen-destructing error rates in their protein biosynthesis. Aminoglycosides also induce mRNA misinterpretation in eukaryotic cells, especially of the UGA (Opal)-stop codon, albeit to a lower extent. UGA recoding is essentially required for the incorporation of selenocysteine (Sec) into growing selenoproteins during translation. Selenocysteine incorporation requires the presence of a selenoprotein-specific stem-loop structure within the 3'-untranslated region of the mRNA, the so-called Sec-insertion sequence (SECIS) element. Interestingly, selenoprotein genes differ in their SECIS-element sequence and in their UGA base context. We hypothesized that the SECIS-element and the specific codon context synergize in controlling the effects of AG on stop codon readthrough. To this end, the SECIS-elements of glutathione peroxidase 1, glutathione peroxidase 4 and selenoprotein P transcripts were cloned into a reporter system and analyzed in combination with different UGA codon contexts. Our results indicate that a cytosine in position 4 (directly downstream of UGA) confers strongest effects on both the Se- and AG-dependent readthrough. Overall selenoprotein biosynthesis rate depends on the Se-status, AG concentration and the specific SECIS-element present in the transcript. These findings help to get a better understanding for the susceptibility of different transcripts towards AG-mediated interference with the biosynthesis of functional Se-containing selenoproteins, and highlight the importance of the Se-status for successful selenoprotein biosynthesis under antibiotic therapy.
Insights
Aminoglycoside antibiotics interfere with selenoprotein synthesis by affecting UGA stop codon readthrough. The SECIS element and downstream DNA sequence significantly influence this antibiotic effect, impacting selenoprotein production.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- Aminoglycosides (AG) are antibiotics that disrupt bacterial protein synthesis.
- AG can also affect eukaryotic translation, particularly the UGA (Opal) stop codon, which is crucial for selenocysteine (Sec) incorporation.
- Selenocysteine incorporation depends on a SECIS element in mRNA and the surrounding codon context.
Purpose of the Study:
- To investigate how the SECIS element and UGA codon context influence AG-mediated stop codon readthrough.
- To understand the factors controlling selenoprotein biosynthesis under AG treatment.
Main Methods:
- Cloning SECIS elements from glutathione peroxidase 1, glutathione peroxidase 4, and selenoprotein P into a reporter system.
- Analyzing reporter systems with different UGA codon contexts in the presence of varying AG concentrations and selenium status.
Main Results:
- A cytosine at position 4 downstream of UGA strongly influenced both Se- and AG-dependent readthrough.
- The rate of selenoprotein biosynthesis was dependent on selenium status, AG concentration, and the specific SECIS element.
- Different transcripts showed varying susceptibility to AG-mediated interference.
Conclusions:
- The SECIS element and codon context synergize to control AG effects on stop codon readthrough.
- Selenium status is critical for successful selenoprotein biosynthesis during antibiotic therapy.
- These findings enhance understanding of AG interference with selenoprotein production.
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