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Gastric Mucosa Quantitative Polymerase Chain Reaction Analysis for Detecting Helicobacter pylori and Antibiotic Resistance
Published on: March 7, 2025
Helicobacter pylori-Clarithromycin Resistance in Symptomatic Pediatric Patients in a High Prevalence Country
Carolina A Serrano1, Miguel A Leon, Camila Palma
1Department of Pediatric Gastroenterology and Nutrition, School of Medicine, Pontificia Universidad Católica de Chile, Santiago, Chile.
Insights
Clarithromycin resistance in pediatric Helicobacter pylori infections is common due to the A2143G mutation. This genetic resistance frequently causes treatment failure in children, highlighting a significant public health concern.
Area of Science:
- Medical Microbiology
- Pediatric Infectious Diseases
- Genetics of Bacterial Resistance
Background:
- Antibiotic resistance in Helicobacter pylori, particularly clarithromycin resistance due to 23S-rRNA gene mutations and metronidazole resistance from rdxA gene deletion, is a major cause of treatment failure.
- Limited data exists on these resistance mechanisms in pediatric populations, especially in developing countries with high H. pylori infection rates.
Purpose of the Study:
- To investigate the prevalence of A2142G/C and A2143G mutations in the 23S-rRNA gene and rdxA gene deletion in symptomatic H. pylori-infected children.
- To assess the impact of these mutations on the eradication success of a standard antibiotic regimen in this pediatric cohort.
Main Methods:
- A cohort of 118 children with gastrointestinal symptoms underwent upper endoscopy for H. pylori detection (urease test, histology).
- Polymerase chain reaction-restriction fragment length polymorphism was used to identify 23S-rRNA gene mutations (A2142G/C, A2143G) and rdxA gene deletion.
- Treatment efficacy was evaluated 8 weeks post-14-day omeprazole, amoxicillin, and clarithromycin therapy using stool antigen tests.
Main Results:
- Approximately 21% of infected children harbored 23S-rRNA gene mutations, with A2143G being the most prevalent. RdxA gene deletion was found in 2% of patients.
- Treatment failure occurred in 25% of patients, and a significant majority (67%) of these treatment failures were associated with the A2143G mutation.
Conclusions:
- Pediatric H. pylori infections in Chile exhibit a high prevalence of the A2143G mutation, a key driver of clarithromycin resistance.
- The presence of the A2143G mutation is strongly linked to the failure to eradicate H. pylori in children, underscoring the need for resistance-guided therapy.
Introduction:
Failure to eradicate Helicobacter pylori despite antibiotic treatment is generally attributed to increasing clarithromycin resistance conferred by point mutations in the 23S-rRNA gene or metronidazole resistance attributed to rdxA gene (HP0954) deletion in patients. Scarce data for pediatric population are available from developing countries.
Objectives:
The aim of the present study was to determine the presence of A2142G/C and A2143G mutations in the 23S-rRNA gene and/or rdxA gene (HP0954) deletion in a group of symptomatic H pylori-infected children recruited from an area with high infection rate and risk of gastric cancer.
Patients And Methods:
We recruited 118 patients referred for upper endoscopy for gastrointestinal symptoms. The presence of H pylori was determined by urease test and histological staining. The rdxA gene (HP0954) deletion, and 2142G/C and A2143G mutations were determined by polymerase chain reaction-restriction fragment length polymorphism. A subgroup of infected patients received a 14-day regimen of omeprazole, amoxicillin, and clarithromycin. The effectiveness of this regime was determined by stool antigen determination 8 weeks after treatment.
Results:
About 21% of the analyzed infected patients showed mutation in the 23S-rRNA gene, with the A2143G transition as the more frequent mutation, and 2% of the patients showed rdxA gene (HP0954) deletion. After treatment, 25% of the patients continued to harbor the bacteria; of these, 67% carried the A2143G mutation.
Conclusions:
H pylori-infected pediatric patients from Chile show high prevalence of the mutation responsible for clarithromycin resistance. The failure to eradicate H pylori can be attributed to the presence of the A2143G mutation.
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