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Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...
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Microfluidic Chip Fabrication and Method to Detect Influenza
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Integrated sample-to-detection chip for nucleic acid test assays.

R Prakash1, K Pabbaraju1, S Wong1

  • 1Provincial Laboratory for Public Health of Alberta, Calgary, 3030 Hospital Drive NW, Calgary, AB, T2N 4W4, Canada.

Biomedical Microdevices
|May 12, 2016
PubMed
Summary

This study presents an integrated microfluidic chip for nucleic acid extraction and real-time PCR. The novel lab-on-chip device enables sensitive and specific infectious agent detection with reduced sample volumes.

Keywords:
DielectrophoresisDroplet microfluidicsElectrowettingLab-on-a-chipNucleic acid testsSample-to-detection

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Area of Science:

  • Biotechnology
  • Microfluidics
  • Molecular Diagnostics

Background:

  • Nucleic acid amplification tests (NATs) are crucial for infectious agent detection.
  • Current NATs often require separate platforms for nucleic acid extraction and real-time PCR.
  • Microfluidic lab-on-chip (LOC) technologies offer potential for integrated diagnostic solutions.

Purpose of the Study:

  • To develop and validate an integrated microfluidic LOC device for simultaneous nucleic acid extraction and real-time, reverse transcription (RT) PCR (qRT-PCR).
  • To assess the performance of the integrated NAT chip compared to standard diagnostic platforms.

Main Methods:

  • Implementation of an electro-actuation based LOC micro-device for sample and reagent droplet manipulation.
  • Integration of chemical lysis with electric field-assisted nucleic acid isolation in a parallel processing scheme.
  • Incorporation of a four-channel parallel qRT-PCR amplification and detection assay on the same chip, utilizing dielectrophoresis, electrostatic/electrowetting actuation, micro-heaters, and temperature sensors.

Main Results:

  • The integrated NAT chip successfully performed chip-based nucleic acid extraction and qRT-PCR from clinical samples.
  • Validation using clinical samples demonstrated comparable sensitivity and specificity to standard platforms.
  • The system achieved up to a 10-fold reduction in sample and reagent volumes.

Conclusions:

  • The developed integrated NAT chip offers a promising solution for point-of-care molecular diagnostics.
  • This microfluidic system streamlines NATs by combining extraction and amplification on a single device.
  • The technology enables efficient and sensitive detection of infectious agents with reduced resource requirements.