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Adaptability and phenotypic stability of common bean genotypes through Bayesian inference.

A M Corrêa1, P E Teodoro2, M C Gonçalves3

  • 1Departamento de Fitotecnia, Universidade Estadual do Mato Grosso do Sul, Aquidauana, MS, Brasil.

Genetics and Molecular Research : GMR
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Summary

This study used Bayesian inference to identify superior common bean genotypes for grain yield. Informative prior distributions improved accuracy in selecting adaptable and stable common bean varieties.

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Area of Science:

  • Agricultural Science
  • Genetics and Breeding
  • Statistical Modeling

Background:

  • Genotype x environment interactions are crucial for common bean (Phaseolus vulgaris) breeding.
  • Understanding these interactions aids in selecting genotypes with broad or specific adaptability.
  • Bayesian inference offers a robust framework for analyzing complex genetic data.

Purpose of the Study:

  • To investigate genotype x environment interactions in common bean using Bayesian inference.
  • To evaluate the efficiency of informative versus minimally informative a priori distributions.
  • To identify common bean genotypes with high adaptability and phenotypic stability.

Main Methods:

  • Six randomized block trials were conducted in Mato Grosso do Sul, Brazil.
  • Thirteen common bean genotypes were assessed for grain yield.
  • Bayesian inference with informative (meta-analysis concept) and minimally informative (high variance) priors was employed.
  • Bayes factors were used for comparing prior distributions and model selection.

Main Results:

  • Bayesian inference effectively identified common bean genotypes with high adaptability and stability using the Eberhart and Russell method.
  • Informative a priori distributions yielded more accurate results than minimally informative ones, as indicated by Bayes factors.
  • Specific adaptable genotypes for favorable environments included EMGOPA-201, BAMBUÍ, CNF 4999, CNF 4129 A 54, and CNFv 8025.
  • Genotypes IAPAR 14 and IAC CARIOCA ETE showed specific adaptability to unfavorable environments.

Conclusions:

  • Bayesian inference is a powerful tool for common bean breeding, enhancing genotype selection.
  • The use of informative a priori distributions significantly improves the precision of genetic analyses.
  • This study identified key common bean genotypes suitable for diverse environmental conditions in the region.