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Related Concept Videos

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Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
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Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
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Updated: Mar 21, 2026

A Customizable Protocol for String Assembly gRNA Cloning STAgR
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Golden Gate Assembly of CRISPR gRNA expression array for simultaneously targeting multiple genes.

Johan Vad-Nielsen1, Lin Lin1, Lars Bolund1

  • 1Department of Biomedicine, Aarhus University, Wilhelm Meyers Alle 4, Building 1242, 8000, Aarhus C, Denmark.

Cellular and Molecular Life Sciences : CMLS
|May 15, 2016
PubMed
Summary

This study presents a new Golden Gate Assembly method for creating CRISPR gene editing arrays, enabling simultaneous targeting of multiple genes in human cells within two weeks. This breakthrough overcomes a key challenge in multiplexed CRISPR applications.

Keywords:
CRISPRCas9Genome editingGolden Gate AssemblySimultaneous multiple gene inhibitionSimultaneous multiple gene knockout

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Area of Science:

  • Molecular Biology
  • Genetics
  • Biotechnology

Background:

  • CRISPR/Cas9 is a powerful genome editing tool.
  • Simultaneously targeting multiple genes in single cells presents a technical hurdle.

Purpose of the Study:

  • To develop an efficient method for generating CRISPR gRNA expression arrays for multiplexed gene targeting.
  • To enable simultaneous targeting of multiple genomic loci or inhibition of multiple genes.

Main Methods:

  • Utilized Golden Gate Assembly for constructing CRISPR gRNA expression arrays.
  • Designed multiplexed gRNA expression array vectors.

Main Results:

  • Developed a method to generate CRISPR gRNA expression arrays in 2 weeks, accommodating up to 30 gRNA expression cassettes.
  • Successfully demonstrated simultaneous targeting of 10 genomic loci in human cells.
  • Achieved simultaneous inhibition of multiple endogenous genes using the multiplexed vector.

Conclusions:

  • The Golden Gate Assembly method provides an efficient solution for multiplexed CRISPR gene editing.
  • The developed vectors facilitate simultaneous targeting and gene inhibition in human cells.
  • Plasmids are available via Addgene for research use.