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Updated: Mar 21, 2026

Production and Measurement of Organic Particulate Matter in the Harvard Environmental Chamber
Published on: November 18, 2018
Isoprene photochemistry over the Amazon rainforest
Yingjun Liu1, Joel Brito2, Matthew R Dorris3
1John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138;
Isoprene photooxidation in the Amazon is affected by pollution. Hydroxyhydroperoxides (ISOPOOH) decrease under polluted conditions, impacting atmospheric chemistry in this vital rainforest region.
Area of Science:
- Atmospheric Chemistry
- Biogeochemical Cycles
- Environmental Science
Background:
- Isoprene photooxidation significantly influences atmospheric chemistry, particularly in forested areas.
- Key reactions involve hydroxyl radicals (OH), leading to isoprene peroxy radicals (ISOPOO).
- Uncertainty exists regarding the dominant reaction pathways of ISOPOO and the impact of anthropogenic pollution.
Purpose of the Study:
- To measure concentrations of hydroxyhydroperoxides (ISOPOOH) and methyl vinyl ketone (MVK) + methacrolein (MACR) in the Amazon basin.
- To investigate the impact of anthropogenic pollution on isoprene photooxidation pathways.
- To compare field measurements with global chemical transport model simulations.
Main Methods:
- Field measurements of ISOPOOH, MVK, and MACR concentrations were conducted during the wet season in the Amazon.
- Air masses sampled included both background and polluted conditions, influenced by an urban region.
- Data analysis focused on the ratio of ISOPOOH to MVK + MACR under varying pollution levels.
Main Results:
- Under background conditions, the ratio of ISOPOOH to MVK + MACR was 0.4-0.6, implying a near-unity ratio for ISOPOO reactions with hydroperoxyl radicals (HO2) and nitric oxide (NO).
- This observed ratio differs significantly from current global chemical transport model simulations for low-NOx forested regions.
- Under polluted conditions (>1 ppb reactive nitrogen), ISOPOOH concentrations fell below detection limits (<60 ppt).
Conclusions:
- The reaction rate ratio of ISOPOO with HO2 to NO is approximately unity under background Amazonian conditions.
- Anthropogenic pollution causes an abrupt shift in isoprene photooxidation, drastically reducing ISOPOOH formation.
- These findings highlight potential future changes in Amazon rainforest photochemistry due to human activities.
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