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Published on: May 3, 2017
Vertically encoded tetragonal hydrogel microparticles for multiplexed detection of miRNAs associated with Alzheimer's
Yoon Ho Roh1, Sang Jun Sim, Il-Joo Cho
1Department of Chemical and Biological Engineering, Korea University, Seoul, Korea. bong98@korea.ac.kr.
Abstract:
Encoded hydrogel particles have attracted attention in diagnostics as these particles can be used for high-performance multiplexed assays. Here, we present encoded tetragonal hydrogel microparticles for multiplexed detection of miRNAs that are strongly related to Alzheimer's disease (AD). The particles are comprised of vertically distinct code and probe regions, and incorporated with quantum dots (QDs) in the code regions. By virtue of the particle geometry, the particles can be synthesized at a high production rate in vertically stacked micro-flows using hydrodynamic focusing lithography. To detect multiple AD-miRNAs, various code labels to identify the loaded probes are designed by changing wavelengths of QDs, increasing the number of code layers and adjusting the thickness of code layers. The probe regions are incorporated with complementary sequences of target miRNAs, and optimized for accurate and timely detection of AD-miRNAs. For proof of concept, we demonstrate the multiplexed capability of the particles by performing a 3-plexed assay of AD-miRNAs.
Insights
New hydrogel particles offer advanced multiplexed diagnostics for Alzheimer's disease (AD) biomarkers. These tetragonal microparticles enable high-throughput detection of multiple AD-related microRNAs (miRNAs) simultaneously.
Area of Science:
- Biomaterials Science
- Nanotechnology
- Molecular Diagnostics
Background:
- Encoded hydrogel particles are valuable for high-performance multiplexed assays.
- MicroRNAs (miRNAs) are crucial biomarkers for Alzheimer's disease (AD).
- Existing diagnostic methods may lack the throughput for comprehensive AD-miRNA profiling.
Purpose of the Study:
- To develop novel encoded tetragonal hydrogel microparticles for multiplexed detection of AD-related miRNAs.
- To engineer particles with distinct code and probe regions for accurate identification and detection.
- To establish a high-production synthesis method for these diagnostic particles.
Main Methods:
- Fabrication of tetragonal hydrogel microparticles using hydrodynamic focusing lithography.
- Incorporation of quantum dots (QDs) in code regions for optical encoding.
- Design of multiplexed codes by varying QD wavelengths, code layers, and layer thickness.
- Functionalization of probe regions with miRNA-specific complementary sequences.
- Demonstration of a 3-plexed assay for simultaneous detection of AD-miRNAs.
Main Results:
- Successful synthesis of encoded tetragonal hydrogel microparticles at high production rates.
- Demonstrated capability to create diverse optical codes using QDs for multiplexing.
- Optimized probe regions for accurate and timely miRNA detection.
- Validated the 3-plexed assay performance for detecting multiple AD-miRNAs.
Conclusions:
- The developed encoded hydrogel microparticles provide a promising platform for high-performance, multiplexed diagnostics of Alzheimer's disease biomarkers.
- The hydrodynamic focusing lithography enables efficient, high-throughput production of these complex microparticles.
- This technology has the potential to advance early diagnosis and monitoring of Alzheimer's disease.
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