Few-photon scattering in dispersive waveguides with multiple qubits

We extend the Krylov-subspace-based time-dependent numerical simulation technique for a qubit interacting with photons in a waveguide to the multiple qubit case. We analyze photon scattering from two qubits and derive expressions for the bound states in the continuum (BICs). We show how the BIC can be excited. We use the BIC in a recent Pauli-Z gate proposal involving decoherence free subspaces and obtain the gate fidelity as a function of the gate parameters. The techniques presented in this Letter are useful for investigating the time evolution of quantum gates and other many-body systems with multiple quenches in the Hamiltonian.