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Published on: April 11, 2016
Interrogating the Cancer Genome to Deliver More Precise Cancer Care
Joaquin Mateo1, Johann S de Bono1
1From The Institute of Cancer Research, Sutton, United Kingdom; The Royal Marsden NHS Foundation Trust, Sutton, United Kingdom.
Abstract:
The aim of precision medicine is to select the best treatment option for each patient at the appropriate time in the natural history of the disease, based on understanding the molecular makeup of the tumor, with the ultimate objective of improving patient survival and quality of life. To achieve it, we must identify functionally distinct subtypes of cancers and, critically, have multiple therapy options available to match to these functional subtypes. As a result of the development of better and less costly next-generation sequencing assays, we can now interrogate the cancer genome, enabling us to use the DNA sequence itself for biomarker studies in drug development. The success of DNA-based biomarkers requires analytical validation and careful clinical qualification in prospective clinical trials. In this article, we review some of the challenges the scientific community is facing as a consequence of this sequencing revolution: reclassifying cancers based on biologic/phenotypic clusters relevant to clinical decision making; adapting how we conduct clinical trials; and adjusting our frameworks for regulatory approvals of biomarker technologies and drugs. Ultimately, we must ensure that this revolution can be safely implemented into routine clinical practice and benefit patients.
Insights
Precision medicine aims to tailor cancer treatments using tumor molecular makeup for better patient outcomes. Challenges include reclassifying cancers, adapting clinical trials, and regulatory frameworks for genomic biomarkers.
Area of Science:
- Oncology
- Genomics
- Translational Medicine
Background:
- Precision medicine seeks to optimize cancer treatment selection based on individual tumor molecular profiles.
- Identifying distinct cancer subtypes and matching them with targeted therapies is crucial for improving patient survival and quality of life.
- Advances in next-generation sequencing (NGS) enable comprehensive cancer genome interrogation for biomarker discovery.
Purpose of the Study:
- To review the challenges posed by the 'sequencing revolution' in precision oncology.
- To discuss the need for reclassifying cancers based on clinically relevant biologic/phenotypic clusters.
- To examine adaptations required in clinical trial design and regulatory approval processes for biomarker technologies and drugs.
Main Methods:
- Review of current challenges in precision medicine implementation.
- Discussion of the impact of next-generation sequencing on cancer research and drug development.
- Analysis of the requirements for analytical validation and clinical qualification of DNA-based biomarkers.
Main Results:
- The sequencing revolution necessitates reclassification of cancers into biologically distinct subtypes.
- Clinical trial methodologies must adapt to evaluate targeted therapies based on genomic biomarkers.
- Regulatory frameworks need adjustment for the approval of novel biomarker technologies and associated drugs.
Conclusions:
- Successful implementation of precision medicine requires addressing challenges in cancer classification, clinical trials, and regulatory pathways.
- Ensuring the safe integration of genomic biomarkers into routine clinical practice is paramount.
- The ultimate goal is to leverage molecular insights from cancer genomics to improve patient outcomes.
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