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Published on: May 2, 2025
Aberrant PD-L1 expression through 3'-UTR disruption in multiple cancers
Keisuke Kataoka1, Yuichi Shiraishi2, Yohei Takeda3
1Department of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto 606-8501, Japan.
Abstract:
Successful treatment of many patients with advanced cancer using antibodies against programmed cell death 1 (PD-1; also known as PDCD1) and its ligand (PD-L1; also known as CD274) has highlighted the critical importance of PD-1/PD-L1-mediated immune escape in cancer development. However, the genetic basis for the immune escape has not been fully elucidated, with the exception of elevated PD-L1 expression by gene amplification and utilization of an ectopic promoter by translocation, as reported in Hodgkin and other B-cell lymphomas, as well as stomach adenocarcinoma. Here we show a unique genetic mechanism of immune escape caused by structural variations (SVs) commonly disrupting the 3' region of the PD-L1 gene. Widely affecting multiple common human cancer types, including adult T-cell leukaemia/lymphoma (27%), diffuse large B-cell lymphoma (8%), and stomach adenocarcinoma (2%), these SVs invariably lead to a marked elevation of aberrant PD-L1 transcripts that are stabilized by truncation of the 3'-untranslated region (UTR). Disruption of the Pd-l1 3'-UTR in mice enables immune evasion of EG7-OVA tumour cells with elevated Pd-l1 expression in vivo, which is effectively inhibited by Pd-1/Pd-l1 blockade, supporting the role of relevant SVs in clonal selection through immune evasion. Our findings not only unmask a novel regulatory mechanism of PD-L1 expression, but also suggest that PD-L1 3'-UTR disruption could serve as a genetic marker to identify cancers that actively evade anti-tumour immunity through PD-L1 overexpression.
Insights
Structural variations disrupting the 3' region of the PD-L1 gene are a novel mechanism for cancer immune escape. This PD-L1 3'-UTR disruption elevates PD-L1 expression, aiding tumor evasion and offering a potential biomarker.
Area of Science:
- Oncology
- Immunology
- Genetics
Background:
- Antibodies targeting programmed cell death 1 (PD-1) and its ligand (PD-L1) have shown success in treating advanced cancers.
- PD-1/PD-L1-mediated immune escape is crucial in cancer development, but its genetic underpinnings are not fully understood.
- Known mechanisms include gene amplification and translocation-driven ectopic promoter use for PD-L1 elevation.
Purpose of the Study:
- To investigate novel genetic mechanisms driving PD-L1 overexpression and cancer immune escape.
- To identify structural variations (SVs) affecting the PD-L1 gene and their functional consequences.
- To explore the potential of PD-L1 3 -untranslated region (UTR) disruption as a biomarker for immune evasion.
Main Methods:
- Analysis of structural variations (SVs) in the 3 region of the PD-L1 gene across various human cancers.
- Assessment of PD-L1 transcript levels and stability following SVs.
- In vivo mouse models to evaluate the impact of PD-L1 3 -UTR disruption on tumor immune evasion and response to PD-1/PD-L1 blockade.
Main Results:
- Common SVs disrupting the PD-L1 3 region were identified in multiple cancer types, including adult T-cell leukaemia/lymphoma (27%), diffuse large B-cell lymphoma (8%), and stomach adenocarcinoma (2%).
- These SVs lead to elevated aberrant PD-L1 transcripts stabilized by 3 -UTR truncation.
- Disruption of the mouse Pd-l1 3 -UTR promoted tumor immune evasion, which was sensitive to Pd-1/Pd-l1 blockade.
Conclusions:
- Structural variations truncating the PD-L1 3 -UTR represent a novel mechanism for immune escape in cancer.
- This genetic alteration leads to increased PD-L1 expression and facilitates tumor evasion of anti-tumor immunity.
- PD-L1 3 -UTR disruption can serve as a genetic marker to identify cancers employing this immune evasion strategy.
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