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Reducing complexity in an agent based reaction model-Benefits and limitations of simplifications in relation to run
David M Rhodes1, Mike Holcombe2, Eva E Qwarnstrom3
1Department of Cardiovascular Science, Medical School, University of Sheffield, Sheffield, S10 2RX, United Kingdom; Department of Computer Science, University of Sheffield, Sheffield, S1 4DP, United Kingdom.
Abstract:
Agent based modelling is a methodology for simulating a variety of systems across a broad spectrum of fields. However, due to the complexity of the systems it is often impossible or impractical to model them at a one to one scale. In this paper we use a simple reaction rate model implemented using the FLAME framework to test the impact of common methods for reducing model complexity such as reducing scale, increasing iteration duration and reducing message overheads. We demonstrate that such approaches can have significant impact on simulation runtime albeit with increasing risk of aberrant system behaviour and errors, as the complexity of the model is reduced.
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