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Updated: Mar 19, 2026

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
Antibiotic-induced gut microbiota disruption during human endotoxemia: a randomised controlled study
Jacqueline M Lankelma1, Duncan R Cranendonk1, Clara Belzer2
1Center for Experimental and Molecular Medicine, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Broad-spectrum antibiotics disrupt the gut microbiota but do not impair systemic innate immune responses in healthy humans during endotoxemia. This challenges previous findings from animal models, highlighting the need for human-specific research.
Area of Science:
- Immunology
- Microbiology
- Pharmacology
Background:
- The gut microbiota plays a crucial role in immune system development and modulating systemic immunity during sepsis.
- Disruption of the gut microbiota by antibiotics may lead to immunosuppression, potentially worsening conditions like sepsis.
Purpose of the Study:
- To investigate whether disrupting the gut microbiota with broad-spectrum antibiotics affects systemic innate immune responses during experimentally induced endotoxemia in healthy human subjects.
Main Methods:
- A proof-of-principle intervention trial involving 16 healthy young men.
- Participants received either broad-spectrum antibiotics (ciprofloxacin, vancomycin, metronidazole) for 7 days or no treatment.
- Endotoxemia was induced intravenously with lipopolysaccharide, and blood and fecal samples were collected for analysis.
Main Results:
- Antibiotic treatment significantly reduced gut microbiota diversity in all subjects.
- No significant differences were observed in clinical parameters, neutrophil influx, cytokine production, coagulation activation, or endothelial activation between antibiotic-treated and control groups during endotoxemia.
- Antibiotic pretreatment did not alter blood leukocyte responsiveness to Toll-like receptor ligands or common sepsis pathogens.
Conclusions:
- Gut microbiota disruption by broad-spectrum antibiotics does not appear to impact systemic innate immune responses in healthy humans during endotoxemia.
- These findings contradict the hypothesis and suggest caution in translating animal model findings directly to human physiology.
- Further research is warranted in critically ill patient populations to confirm these results.
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