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Whole-Genome Sequence of Hafnia alvei HUMV-5920, a Human Isolate
María Lázaro-Díez1, Santiago Redondo-Salvo2, Aroa Arboleya-Agudo3
1Servicio de Microbiología, Hospital Universitario Marqués de Valdecilla, Santander, Cantabria, Spain Instituto de Investigación Sanitaria Valdecilla (IDIVAL), Santander, Cantabria, Spain Red Española de Investigación en Patología Infecciosa (REIPI), Instituto de Salud Carlos III, Madrid, Spain.
Abstract:
A clinical isolate of Hafnia alvei (strain HUMV-5920) was obtained from a urine sample from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time (SMRT) sequencing, which resulted in a chromosome with 4.5 Mb and a circular contig of 87 kb. About 4,146 protein-coding genes are predicted from this assembly.
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