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Published on: March 20, 2018
Association between the CYP11 family and six cancer types
Ziwei Fan1, Zhen Wang2, Weiran Chen1
1School of Life Science and Technology, Tongji University, Shanghai 200092, P.R. China; Key Lab of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institute for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, P.R. China.
Abstract:
Cytochromes P450 (CYPs) are a major source of variability in pharmacokinetics and drug response. CYPs utilize a variety of small and large molecules as substrates in enzymatic reactions. The CYP genes may be divided into two groups: Endogenous CYPs (CYP family 7-51) and xenobiotic CYPs (CYP family 1-4). The aim of the present study was to investigate whether endogenous CYPs exhibit similar gene expression and mutations in various cancer types. The gene expression profiles and somatic mutations exhibited in colon adenocarcinoma, kidney renal clear cell carcinoma, liver hepatocellular carcinoma, lung squamous cell carcinoma, prostate adenocarcinoma and uterine corpus endometrial carcinoma were analyzed using data obtained from The Cancer Genome Atlas. The expression of CYP11A1 was significantly downregulated in all six cancer types. In addition, CYP11B1 and CYP11B2 exhibited the highest number of mutations among endogenous CYPs in all samples. As the CYP11 family is important for steroid biosynthesis, and previous studies have demonstrated that steroid hormones are associated with certain cancers, these results indicate a common role of the CYP11 family in various cancer types.
Insights
Endogenous cytochromes P450 (CYPs) show altered expression and mutations across multiple cancer types. The CYP11 family, crucial for steroid biosynthesis, appears commonly involved in various cancers.
Area of Science:
- Biochemistry
- Genetics
- Oncology
Background:
- Cytochromes P450 (CYPs) are critical enzymes influencing drug metabolism and response.
- CYP genes are categorized into endogenous (families 7-51) and xenobiotic (families 1-4) groups.
- CYP variability contributes significantly to pharmacokinetic differences and drug efficacy.
Purpose of the Study:
- To investigate gene expression and mutation patterns of endogenous CYPs in diverse cancer types.
- To determine if endogenous CYPs share common alterations in cancer.
- To explore the potential role of the CYP11 family in cancer development.
Main Methods:
- Analysis of gene expression profiles and somatic mutations from The Cancer Genome Atlas (TCGA).
- Focus on six cancer types: colon adenocarcinoma, kidney renal clear cell carcinoma, liver hepatocellular carcinoma, lung squamous cell carcinoma, prostate adenocarcinoma, and uterine corpus endometrial carcinoma.
- Comparative analysis of endogenous CYP alterations across these cancer types.
Main Results:
- CYP11A1 expression was significantly downregulated in all six analyzed cancer types.
- CYP11B1 and CYP11B2 displayed the highest mutation frequencies among endogenous CYPs across all samples.
- Consistent downregulation of CYP11A1 and high mutation rates in CYP11B1/B2 suggest a common role.
Conclusions:
- The CYP11 family, vital for steroid biosynthesis, shows common alterations in various cancers.
- Steroid hormone pathways, regulated by CYP11, may be frequently implicated in cancer pathogenesis.
- These findings highlight a potential shared mechanism involving endogenous CYPs in diverse oncological settings.
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