Related Experiment Video
Updated: Mar 18, 2026

Characterizing Individual Protein Aggregates by Infrared Nanospectroscopy and Atomic Force Microscopy
Published on: September 12, 2019
NEXAFS spectroscopy and site-specific fragmentation of N-methylformamide, N,N-dimethylformamide, and
Peter Salén1, Vasyl Yatsyna2, Luca Schio3
1Department of Physics, Stockholm University, 106 91 Stockholm, Sweden.
Abstract:
Near-edge X-ray absorption fine-structure (NEXAFS) spectra measured at the C, N, and O K-edges for three molecules containing the amide moiety, N-methylformamide (HCONHCH3), N,N-dimethylformamide (HCON(CH3)2), and N,N-dimethylacetamide (CH3CON(CH3)2) are presented. These molecules have similar structures and differ by the number of methyl groups located at the molecular ends. The fragmentation of these molecules after resonant excitation at different K-edge resonances is also investigated, using a 3D-ion imaging time-of-flight spectrometer. A comparison between the molecules with respect to the relative contributions of the fragments created upon excitation at distinct resonances reveals site-specific fragmentation. Further information about the character of the core-excitation and dissociation process is obtained from the angular distributions of the ion fragments.
Related Concept Videos
Mass Spectrometry: Carboxylic Acid, Ester, and Amide Fragmentation
For example, the...
Mass Spectrometry of Amines
Mass Spectrometry: Amine Fragmentation
In amines, the number of nitrogen atoms affects the mass of the molecular ion, which is described by the nitrogen rule of mass spectrometry. This rule states that a compound containing a single...
Mass Spectrometry: Long-Chain Alkane Fragmentation
Atomic Fluorescence Spectroscopy
¹H NMR: Complex Splitting
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied...

