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Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation
Published on: June 21, 2016
Retinoic Acid Modulates PTGDR Promoter Activity
A García-Sánchez1,2, E Marcos-Vadillo2,3, C Sanz2,4
11Department of Biomedical and Diagnostic Science, University of Salamanca, Salamanca, Spain.
Retinoic acid (RA) activates the PTGDR gene promoter, a key player in allergic diseases. This finding suggests potential new treatments for allergies and asthma based on modulating PTGDR activity, considering genetic variations.
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- Vitamin A metabolites, including retinoic acid (RA), are implicated in allergic disease development.
- The prostaglandin receptor PTGDR is a candidate gene for allergy and asthma, potentially linked to RA via the prostaglandin pathway.
Purpose of the Study:
- To investigate the effect of retinoic acid (RA) on the activation of the PTGDR gene promoter.
- To explore the role of PTGDR in the context of allergic diseases and RA signaling.
Main Methods:
- A549 lung epithelial cells were transfected with PTGDR promoter variants and treated with all-trans RA (ATRA).
- Luciferase assays and real-time quantitative PCR were used to measure gene expression and promoter activity.
- In silico analysis identified potential RA response elements in the PTGDR promoter.
Main Results:
- ATRA treatment significantly increased PTGDR promoter activity (P<.001).
- Expression of CYP26A1 and RARB genes increased 12-fold and 4-fold, respectively, after ATRA treatment.
- In silico analysis confirmed the presence of RA response elements within the PTGDR promoter region.
Conclusions:
- Retinoic acid (RA) modulates PTGDR gene promoter activity.
- The effectiveness of RA and potential new PTGDR-targeting therapies may depend on the genetic background of allergic asthma patients.
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