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A Data Integration Workflow to Identify Drug Combinations Targeting Synthetic Lethal Interactions
Published on: May 27, 2021
PARG deficiency is neither synthetic lethal with BRCA1 nor PTEN deficiency
Aurélia Noll1, Giuditta Illuzzi1, Jean-Christophe Amé1
1Biotechnology and Cell Signalling, UMR7242 CNRS, Université de Strasbourg, Laboratory of Excellence Medalis, ESBS, 300 Bd Sébastien Brant, CS 10413, 67412 Illkirch, France.
Background:
Poly(ADP-ribose) polymerase (PARP) inhibitors have entered the clinics for their promising anticancer effect as adjuvant in chemo- and radiotherapy and as single agent on BRCA-mutated tumours. Poly(ADP-ribose) glycohydrolase (PARG) deficiency was also shown to potentiate the cytotoxicity of genotoxic agents and irradiation. The aim of this study is to investigate the effect of PARG deficiency on BRCA1- and/or PTEN-deficient tumour cells.
Methods:
Since no PARG inhibitors are available for in vivo studies, PARG was depleted by siRNA in several cancer cell lines, proficient or deficient for BRCA1 and/or PTEN. The impact on cell survival was evaluated by colony formation assay and short-term viability assays. The effect of simultaneous PARG and BRCA1 depletion on homologous recombination (HR) efficacy was evaluated by immunodetection of RAD51 foci and using an in vivo HR assay.
Results:
The BRCA1-deficient cell lines MDA-MB-436, HCC1937 and UWB1.289 showed mild sensitivity to PARG depletion, whereas no sensitivity was observed for the BRCA1-proficient MDA-MB-231, MDA-MB-468, MCF10A and U2OS cell lines. However, the BRCA1-reconstituted UWB1.289 cell lines was similarly sensitive to PARG depletion than the BRCA1-deficient UWB1.289, and the simultaneous depletion of PARG and BRCA1 and/or PTEN in MDA-MB-231 or U2OS cells was not more cytotoxic than depletion of BRCA1 or PTEN only.
Conclusions:
Some tumour cells displayed slight sensitivity to PARG deficiency, but this sensitivity could not be correlated to BRCA1- or PTEN-deficiency. Therefore, PARG depletion cannot be considered as a strategy to kill tumours cells mutated in BRCA1 or PTEN.
Insights
Poly(ADP-ribose) glycohydrolase (PARG) depletion showed mild sensitivity in some BRCA1-deficient tumor cells. However, PARG deficiency is not a viable strategy for killing BRCA1- or PTEN-mutated cancers.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genetics
Background:
- Poly(ADP-ribose) polymerase (PARP) inhibitors are used in cancer therapy, particularly for BRCA-mutated tumors.
- Poly(ADP-ribose) glycohydrolase (PARG) deficiency can enhance the effects of DNA-damaging agents.
- This study investigates PARG deficiency's impact on tumor cells with BRCA1 and/or PTEN mutations.
Purpose of the Study:
- To determine if PARG deficiency sensitizes BRCA1- and/or PTEN-deficient tumor cells to genotoxic stress.
- To evaluate PARG depletion as a potential therapeutic strategy for specific cancer types.
Main Methods:
- PARG was depleted using siRNA in various cancer cell lines with different BRCA1 and PTEN statuses.
- Cell survival was assessed via colony formation and viability assays.
- Homologous recombination (HR) efficacy was evaluated by RAD51 foci and an in vivo HR assay.
Main Results:
- BRCA1-deficient cell lines showed mild sensitivity to PARG depletion, while proficient cell lines did not.
- Restoring BRCA1 in deficient cells did not alter sensitivity to PARG depletion.
- Simultaneous depletion of PARG with BRCA1 or PTEN did not increase cytotoxicity compared to single depletions.
Conclusions:
- PARG depletion induced slight sensitivity in some tumor cells, but this was not linked to BRCA1 or PTEN deficiency.
- PARG depletion is unlikely to be an effective strategy for targeting tumors with BRCA1 or PTEN mutations.
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