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Updated: Mar 18, 2026

Antibiotic Efficacy Testing in an Ex vivo Model of Pseudomonas aeruginosa and Staphylococcus aureus Biofilms in the Cystic Fibrosis Lung
Published on: January 22, 2021
PREVALENCE, ANTIBIOTIC AND PULSED-FIELD GEL ELECTROPHORESIS PATTERNS OF STAPHYLOCOCCUS AUREUS SMALL-COLONY VARIANTS
Abstract:
Staphylococcus aureus is the most common pathogen isolated from respiratory tract samples in cystic fibrosis (CF) cases. Rate of infection with S. aureus small-colony variants (SCVs) also is increasing in CF patients. In this study, we aimed to determine the prevalence, antibiotic susceptibility and genotypic property of S. aureus SCVs in respiratory tract samples of CF patients admitted to Istanbul Faculty of Medicine Hospital, Turkey. Among 305 respiratory tract samples from 84 CF patients, normal S. aureus isolates were present in 71% of the CF patients and S. aureus SCVs in 21%. The highest antibiotic resistance was against penicillin (82%) followed by clarithromycin (21%) in S. aureus SCVs, while resistance to levofloxacin was low (2%) in normal S. aureus isolates but was 16% in S. aureus SCVs. No mecA and mecC were detected. The S. aureus strains constituted 24 different genotypes based on pulsed field gel-electrophoresis assay. The possible existence of S. aureus SCVs that are more resistant to antibiotis than normal S. aureus should be taken into considerstion when treating CF patients for this pernicious bacterial infection.
Insights
Staphylococcus aureus small-colony variants (SCVs) are increasingly found in cystic fibrosis patients. These SCVs show higher antibiotic resistance, necessitating careful treatment considerations for this infection.
Area of Science:
- Medical Microbiology
- Infectious Diseases
- Pulmonology
Background:
- Staphylococcus aureus is a primary pathogen in cystic fibrosis (CF) respiratory infections.
- An increasing prevalence of S. aureus small-colony variants (SCVs) is observed in CF patients.
- Understanding the characteristics of S. aureus SCVs is crucial for effective CF patient management.
Purpose of the Study:
- To investigate the prevalence of S. aureus SCVs in CF patients.
- To determine the antibiotic susceptibility profiles of S. aureus SCVs.
- To analyze the genotypic properties of S. aureus SCVs in Turkish CF patients.
Main Methods:
- Respiratory tract samples from 84 CF patients were analyzed.
- Isolation and identification of normal S. aureus and S. aureus SCVs.
- Antibiotic susceptibility testing was performed.
- Genotyping was conducted using pulsed-field gel electrophoresis (PFGE).
Main Results:
- S. aureus was found in 71% of CF patients, with SCVs identified in 21%.
- S. aureus SCVs exhibited high resistance to penicillin (82%) and clarithromycin (21%).
- Levofloxacin resistance was higher in SCVs (16%) compared to normal S. aureus (2%).
- No mecA or mecC genes were detected.
- PFGE revealed 24 distinct S. aureus genotypes.
Conclusions:
- S. aureus SCVs are prevalent in CF patients and demonstrate distinct antibiotic resistance patterns.
- Elevated resistance in SCVs, particularly to levofloxacin, warrants clinical attention.
- Genotypic diversity exists among S. aureus strains in this CF cohort.
- Treatment strategies for CF patients should consider the potential for increased antibiotic resistance in S. aureus SCVs.

