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Investigation of the Transcriptional Role of a RUNX1 Intronic Silencer by CRISPR/Cas9 Ribonucleoprotein in Acute Myeloid Leukemia Cells
Published on: September 1, 2019
Small Molecule Inhibitor of CBFβ-RUNX Binding for RUNX Transcription Factor Driven Cancers
Anuradha Illendula1, Jane Gilmour2, Jolanta Grembecka3
1Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA, USA.
Abstract:
Transcription factors have traditionally been viewed with skepticism as viable drug targets, but they offer the potential for completely novel mechanisms of action that could more effectively address the stem cell like properties, such as self-renewal and chemo-resistance, that lead to the failure of traditional chemotherapy approaches. Core binding factor is a heterodimeric transcription factor comprised of one of 3 RUNX proteins (RUNX1-3) and a CBFβ binding partner. CBFβ enhances DNA binding of RUNX subunits by relieving auto-inhibition. Both RUNX1 and CBFβ are frequently mutated in human leukemia. More recently, RUNX proteins have been shown to be key players in epithelial cancers, suggesting the targeting of this pathway could have broad utility. In order to test this, we developed small molecules which bind to CBFβ and inhibit its binding to RUNX. Treatment with these inhibitors reduces binding of RUNX1 to target genes, alters the expression of RUNX1 target genes, and impacts cell survival and differentiation. These inhibitors show efficacy against leukemia cells as well as basal-like (triple-negative) breast cancer cells. These inhibitors provide effective tools to probe the utility of targeting RUNX transcription factor function in other cancers.
Insights
Small molecules targeting the core binding factor beta (CBFβ) transcription factor show promise for treating leukemia and triple-negative breast cancer by inhibiting cancer stem cell properties. These novel inhibitors offer new therapeutic avenues for difficult-to-treat cancers.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Transcription factors, like core binding factor (CBF), are increasingly recognized as potential drug targets for cancer therapy.
- CBF, a heterodimer of RUNX proteins and CBFβ, is crucial for cell functions and frequently mutated in leukemia.
- RUNX proteins also play significant roles in epithelial cancers, indicating broad therapeutic potential.
Purpose of the Study:
- To develop small molecules that inhibit the interaction between CBFβ and RUNX proteins.
- To investigate the efficacy of these inhibitors in preclinical cancer models.
Main Methods:
- Development of small molecule inhibitors targeting CBFβ.
- Assays to measure the impact of inhibitors on RUNX binding to DNA and gene expression.
- Testing inhibitor efficacy in leukemia and basal-like breast cancer cell lines.
Main Results:
- Small molecules successfully inhibited CBFβ binding to RUNX proteins.
- Inhibitors reduced RUNX1 binding to target genes and altered gene expression.
- Treatment with inhibitors affected cancer cell survival and differentiation.
- Demonstrated efficacy against leukemia and triple-negative breast cancer cells.
Conclusions:
- Targeting the RUNX-CBFβ pathway with small molecule inhibitors is a viable strategy for cancer treatment.
- These inhibitors provide valuable tools for further research into RUNX transcription factor function in various cancers.
- This approach offers potential for novel mechanisms to overcome chemo-resistance and cancer stem cell properties.
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