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An Organic Anion Transporter 1 (OAT1)-centered Metabolic Network
Henry C Liu1, Neema Jamshidi1, Yuchen Chen2
1From the Departments of Bioengineering.
Abstract:
There has been a recent interest in the broader physiological importance of multispecific "drug" transporters of the SLC and ABC transporter families. Here, a novel multi-tiered systems biology approach was used to predict metabolites and signaling molecules potentially affected by the in vivo deletion of organic anion transporter 1 (Oat1, Slc22a6, originally NKT), a major kidney-expressed drug transporter. Validation of some predictions in wet-lab assays, together with re-evaluation of existing transport and knock-out metabolomics data, generated an experimentally validated, confidence ranked set of OAT1-interacting endogenous compounds enabling construction of an "OAT1-centered metabolic interaction network." Pathway and enrichment analysis indicated an important role for OAT1 in metabolism involving: the TCA cycle, tryptophan and other amino acids, fatty acids, prostaglandins, cyclic nucleotides, odorants, polyamines, and vitamins. The partly validated reconstructed network is also consistent with a major role for OAT1 in modulating metabolic and signaling pathways involving uric acid, gut microbiome products, and so-called uremic toxins accumulating in chronic kidney disease. Together, the findings are compatible with the hypothesized role of drug transporters in remote inter-organ and inter-organismal communication: The Remote Sensing and Signaling Hypothesis (Nigam, S. K. (2015) Nat. Rev. Drug Disc. 14, 29). The fact that OAT1 can affect many systemic biological pathways suggests that drug-metabolite interactions need to be considered beyond simple competition for the drug transporter itself and may explain aspects of drug-induced metabolic syndrome. Our approach should provide novel mechanistic insights into the role of OAT1 and other drug transporters implicated in metabolic diseases like gout, diabetes, and chronic kidney disease.
Insights
Organic anion transporter 1 (Oat1) deletion impacts numerous metabolic pathways, including the TCA cycle and amino acid metabolism. This highlights Oat1's role in systemic communication and metabolic diseases.
Area of Science:
- Physiology
- Systems Biology
- Metabolomics
Background:
- Multispecific drug transporters (SLC and ABC families) are increasingly recognized for their physiological roles.
- Organic anion transporter 1 (Oat1), a key kidney transporter, has an incompletely understood impact on endogenous metabolism.
- Understanding Oat1's function is crucial for metabolic disease research.
Purpose of the Study:
- To predict and experimentally validate metabolites and signaling molecules affected by Oat1 deletion.
- To construct a systems biology-based OAT1-centered metabolic interaction network.
- To elucidate Oat1's role in systemic metabolic and signaling pathways.
Main Methods:
- A multi-tiered systems biology approach integrating computational predictions with wet-lab validation.
- Re-evaluation of existing transport and metabolomics data.
- Pathway and enrichment analysis of the OAT1 interaction network.
Main Results:
- An experimentally validated, confidence-ranked set of OAT1-interacting endogenous compounds was generated.
- Oat1 deletion significantly affects metabolism in pathways including the TCA cycle, amino acids, fatty acids, and prostaglandins.
- The network implicates Oat1 in regulating uric acid, gut microbiome products, and uremic toxins.
Conclusions:
- Oat1 plays a critical role in systemic metabolic regulation and inter-organ communication, supporting the Remote Sensing and Signaling Hypothesis.
- Drug-metabolite interactions mediated by transporters like Oat1 extend beyond simple competition and influence drug-induced metabolic syndrome.
- These findings offer mechanistic insights into Oat1's involvement in metabolic diseases such as gout, diabetes, and chronic kidney disease.
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