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Quantitative Structure-Fluorescence Property Relationship Analysis of a Large BODIPY Library
Andreas Schüller1,2, Garrett Benjamin Goh3, Hanjo Kim2,3
1Duke-NUS Graduate Medical School, Program in Emerging Infectious Diseases, 8 College Road, Singapore 169857.
Quantitative structure-property relationship (QSPR) analysis modeled BODIPY fluorophore properties. Support vector regression (SVR) models accurately predicted absorption and emission wavelengths, aiding custom fluorophore design.
Area of Science:
- Computational chemistry
- Photophysics
- Medicinal chemistry
Background:
- BODIPY dyes are versatile fluorophores with excellent photophysical properties.
- Quantitative Structure-Property Relationship (QSPR) analysis can predict molecular properties.
- Developing predictive models for BODIPY fluorescence is crucial for targeted applications.
Purpose of the Study:
- To establish the first quantitative structure-fluorescence property relationship (QSPR) analysis for a large BODIPY library.
- To model and predict absorption (λabs) and fluorescence emission (λem) wavelength maxima of BODIPY derivatives.
- To develop novel descriptors for improved fluorescence property prediction.
Main Methods:
- Utilized stepwise multiple linear regression (MLR) and support vector regression (SVR) for QSPR modeling.
- Performed rigorous model validation using 10-fold cross-validation (CV), y-scrambling CV, and an external validation set.
- Developed and incorporated a novel intramolecular charge transfer descriptor into the QSPR models.
Main Results:
- Non-linear SVR models significantly outperformed linear MLR models, achieving high R² and Q² values (e.g., R²=0.92, Q²=0.71 for λabs).
- Achieved low root mean squared errors (RMSE) of 5.62 nm for λabs and 11.07 nm for λem, confirmed by external validation.
- The novel intramolecular charge transfer descriptor substantially improved the prediction accuracy of λem models.
Conclusions:
- QSPR is an effective tool for modeling and predicting the absorption and emission wavelengths of BODIPY fluorophores.
- SVR provides a robust and accurate method for developing QSPR models for fluorescence properties.
- This QSPR approach facilitates the rational design of BODIPY compounds with tailored fluorescence characteristics within a diversity-oriented fluorescence library approach (DOFLA).
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