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Updated: Mar 17, 2026

Quantitative Polymerase Chain Reaction-based Analyses of Murine Intestinal Microbiota After Oral Antibiotic Treatment
Published on: November 17, 2018
Human commensals producing a novel antibiotic impair pathogen colonization
Alexander Zipperer1,2, Martin C Konnerth3, Claudia Laux1,2
1Interfaculty Institute of Microbiology and Infection Medicine, Infection Biology, University of Tübingen, 72076 Tübingen, Germany.
Nasal bacteria Staphylococcus lugdunensis produce a novel antibiotic, lugdunin, that prevents colonization by the pathogen Staphylococcus aureus. This discovery highlights the potential of human microbiota as a source for new antibiotics to combat resistant bacteria.
Area of Science:
- Microbiology and Infectious Diseases
- Drug Discovery and Development
- Human Microbiome Research
Background:
- Systemic bacterial infections often stem from antibiotic-resistant pathogens colonizing human surfaces.
- Nasal carriage of Staphylococcus aureus is a known risk factor for invasive infections, but colonization mechanisms are poorly understood.
- Antibiotic production by human commensal bacteria, unlike soil microbes, is rarely reported.
Purpose of the Study:
- To investigate the mechanisms of pathogen colonization on human body surfaces, specifically nasal carriage.
- To identify novel antimicrobial compounds produced by human commensal bacteria.
- To explore the potential of these compounds and bacteria for preventing staphylococcal infections.
Main Methods:
- Identification and characterization of antimicrobial compounds produced by nasal Staphylococcus lugdunensis strains.
- Determination of the chemical structure and properties of the novel antibiotic, lugdunin.
- Assessment of lugdunin's bactericidal activity against major pathogens and its efficacy in animal models.
- Evaluation of S. lugdunensis colonization rates in humans and its association with S. aureus carriage.
Main Results:
- Staphylococcus lugdunensis produces lugdunin, a novel cyclic peptide antibiotic.
- Lugdunin exhibits bactericidal activity against major pathogens and is effective in animal models without readily inducing resistance in S. aureus.
- Human nasal colonization by S. lugdunensis correlates with significantly reduced S. aureus carriage rates.
Conclusions:
- Lugdunin is a potent antibiotic produced by a human commensal bacterium, effective against key pathogens.
- Lugdunin-producing commensal bacteria, like S. lugdunensis, show promise for preventing staphylococcal infections.
- The human microbiota represents a valuable, yet underexplored, source for novel antibiotic discovery.
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