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Updated: Mar 16, 2026

Fluorescently Labeled Bacteria as a Tracer to Reveal Novel Pathways of Organic Carbon Flow in Aquatic Ecosystems
Published on: September 13, 2019
Protistan predation interferes with bacterial long-term adaptation to substrate restriction by selecting for defence
M Baumgartner1, T R Neu2, J F Blom1
1Limnological Station, Department of Plant and Microbial Biology, University of Zürich, Kilchberg, Switzerland.
Bacteria evolved differently when facing low nutrients versus predation. Predators favored defense traits like aggregation, while nutrient scarcity boosted growth, leading to distinct bacterial phenotypes and reduced adaptability.
Area of Science:
- Microbial Ecology
- Evolutionary Biology
- Aquatic Microbiology
Background:
- Aquatic bacteria face a trade-off between growth in low-nutrient environments and defense against protistan grazing.
- Bacterial survival strategies include enhanced growth or forming aggregates for protection, but these traits can be mutually exclusive.
Purpose of the Study:
- To investigate the evolutionary response of freshwater bacteria (Sphingobium sp. strain Z007) to distinct selective pressures: low substrate availability and protistan predation.
- To determine if nutrient limitation or predation pressure drives the evolution of bacterial growth performance versus defense mechanisms.
Main Methods:
- An evolutionary experiment was conducted over 26 weeks using Sphingobium sp. strain Z007.
- Cultures were maintained under two conditions: with flagellate predators (P+) and without predators (P-).
- Evolved bacterial phenotypes were analyzed for aggregate formation, growth yield, and metabolic versatility.
Main Results:
- Bacteria evolved distinct phenotypes under predation (P+) versus nutrient limitation (P-).
- P- strains showed increased growth yield and metabolic versatility but reduced aggregation.
- P+ strains exhibited higher aggregation (defense) but lower growth yield and metabolic versatility, losing phenotypic plasticity.
Conclusions:
- Transient exposure to oligotrophic conditions can favor facultative oligotrophic lifestyles in bacteria, aiding aquatic survival.
- Investment in anti-predation defense can limit bacterial adaptation to abiotic environmental changes.
- Evolutionary pressures in aquatic habitats shape bacterial strategies, balancing growth and survival needs.
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