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Updated: Mar 16, 2026

Long-range Channelrhodopsin-assisted Circuit Mapping of Inferior Colliculus Neurons with Blue and Red-shifted Channelrhodopsins
Published on: February 7, 2020
Cellular resolution circuit mapping with temporal-focused excitation of soma-targeted channelrhodopsin
Christopher A Baker1, Yishai M Elyada2, Andres Parra2
1Disorders of Neural Circuit Function, Max Planck Florida Institute for Neuroscience, Jupiter, United States.
Abstract:
We describe refinements in optogenetic methods for circuit mapping that enable measurements of functional synaptic connectivity with single-neuron resolution. By expanding a two-photon beam in the imaging plane using the temporal focusing method and restricting channelrhodopsin to the soma and proximal dendrites, we are able to reliably evoke action potentials in individual neurons, verify spike generation with GCaMP6s, and determine the presence or absence of synaptic connections with patch-clamp electrophysiological recording.

