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Detection of Horizontal Gene Transfer Mediated by Natural Conjugative Plasmids in E. coli
Published on: March 24, 2023
Plasmid-mediated quinolone resistance among extended spectrum beta lactase producing Enterobacteriaceae from
Judit Domokos1, Katalin Kristóf2, Dóra Szabó1
11 Institute of Medical Microbiology, Semmelweis University , Budapest, Hungary.
Abstract:
The purpose of this study was to determine prevalence and molecular characterization of plasmid-mediated quinolone resistance (PMQR) genes [qnrA, qnrB, qnrC, qnrD, qnrS, aac(6')-Ib-cr, qepA, and oqxAB] among extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli and Klebsiella spp. isolates from bloodcultures in Hungary. A total of 103 isolates were tested for quinolone susceptibility by microdilution method and PMQR genes were detected by polymerase chain reaction. About 40 ESBL-producing E. coli (39%) and 50 ESBL-producing Klebsiella spp. strains (48%) were resistant to ciprofloxacin; 40 ESBL-producing E. coli (39%) and 47 ESBL-producing Klebsiella spp. strains (45%) were resistant to levofloxacin; and 88 strains including 40 ESBL-producing E. coli (39%) and 48 (47%) ESBL-producing Klebsiella spp. were resistant to moxifloxacin. Among the 103 ESBL-producing isolates, 77 (75%) isolates (30 E. coli and 47 Klebsiella spp.) harbored PMQR genes. The most commonly detected gene was aac(6')-Ib-cr (65%). The occurrence of qnrS gene was 6%. Interestingly, qnrA, qnrB, qnrC, qnrD, and qepA were not found in any isolates. Among 77 PMQR-positive isolates, 27 (35.1%) and 1 (1.3%) carried two and three different PMQR genes, respectively. Only Klebsiella spp. harbored more than one PMQR genes. Observing prevalence of PMQR genes in the last 8 years, the increasing incidence of aac(6')-Ib-cr and oqxAB can be seen. Our results highlight high frequency of PMQR genes among ESBL-producing Klebsiella pneumoniae and E. coli isolates with an increasing dynamics in Hungary.
Insights
Plasmid-mediated quinolone resistance genes are common in Hungary, especially aac(6')-Ib-cr. Researchers found increasing rates of these resistance genes in extended-spectrum beta-lactamase producing E. coli and Klebsiella spp. bloodstream infections.
Area of Science:
- Microbiology
- Molecular Biology
- Antimicrobial Resistance
Background:
- Extended-spectrum beta-lactamase (ESBL)-producing Gram-negative bacteria pose a significant global health threat.
- Plasmid-mediated quinolone resistance (PMQR) genes contribute to reduced susceptibility to fluoroquinolones.
- Understanding the prevalence of PMQR genes in clinically relevant bacteria is crucial for effective treatment strategies.
Purpose of the Study:
- To determine the prevalence and molecular characteristics of PMQR genes in ESBL-producing Escherichia coli and Klebsiella spp. isolated from blood cultures in Hungary.
- To investigate the association between PMQR genes and resistance to specific quinolone antibiotics.
- To analyze trends in PMQR gene prevalence over an eight-year period.
Main Methods:
- Isolates of ESBL-producing E. coli and Klebsiella spp. from blood cultures were collected.
- Quinolone susceptibility testing was performed using the microdilution method.
- Polymerase chain reaction (PCR) was employed to detect the presence of specific PMQR genes (qnrA, qnrB, qnrC, qnrD, qnrS, aac(6')-Ib-cr, qepA, and oqxAB).
Main Results:
- A high frequency of PMQR genes was observed, with 75% (77/103) of ESBL-producing isolates harboring at least one PMQR gene.
- The most prevalent PMQR gene was aac(6')-Ib-cr (65%), followed by qnrS (6%).
- Genes qnrA, qnrB, qnrC, qnrD, and qepA were not detected. Increasing incidence of aac(6 ext{ extquoteright})-Ib-cr and oqxAB genes was noted over the past eight years.
Conclusions:
- PMQR genes are highly prevalent among ESBL-producing E. coli and Klebsiella spp. in Hungarian bloodstream infections.
- The aac(6 ext{ extquoteright})-Ib-cr gene is the dominant PMQR determinant in this population.
- The increasing prevalence of certain PMQR genes highlights the dynamic nature of antimicrobial resistance and necessitates ongoing surveillance.
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