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Evolutionary processes and cellular functions underlying divergence in Alexandrium minutum.
Mickael Le Gac1, Gabriel Metegnier2,3, Nicolas Chomérat4
1Ifremer, DYNECO PELAGOS, 29280, Plouzané, France. Mickael.Le.Gac@ifremer.fr.
Molecular Ecology
|August 21, 2016
Summary
Harmful algal bloom dinoflagellates, Alexandrium minutum, show genetic divergence driven by selective pressures and gene flow. Key differences in calcium signaling and toxin production genes may explain their ecological separation.
Area of Science:
- Marine biology
- Genomics
- Evolutionary biology
Background:
- Pelagic environments pose challenges for studying organismal divergence.
- Alexandrium minutum, a globally significant harmful algal bloom (HAB) dinoflagellate, is difficult to study due to its small size, complex genome, and dynamic habitat.
Purpose of the Study:
- To investigate the functional basis of a divergence event in Alexandrium minutum.
- To understand the role of selective pressures and gene flow in dinoflagellate speciation.
Main Methods:
- Transcriptome-wide mRNA sequencing of 18 Alexandrium minutum strains.
- Morphological analysis.
- Joint Site Frequency Spectrum (JSFS) analysis to infer population history and gene flow.
Main Results:
- Evidence suggests an ancestral isolation followed by secondary contact with heterogeneous gene flow.
- Fixed single nucleotide polymorphisms (SNPs) indicate restricted gene flow and strong selective pressures.
- Highly divergent transcripts are associated with calcium/potassium fluxes, calcium signaling, and saxitoxin production.
Conclusions:
- Selective pressures, particularly on genes related to ion transport and toxin synthesis, are key drivers of Alexandrium minutum divergence.
- These genetic differences likely contribute to ecological divergence and reproductive isolation.
- High-throughput sequencing can reveal ecologically and evolutionarily important traits in challenging organisms like dinoflagellates.
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