Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Multi-Layered Genomic and Clinical Analysis Identifies Novel Variants, Co-Occurring Single Nucleotide Polymorphism Pairs, and Clinical Determinants of Host-Pathogen Interaction in COVID-19 Severity.

Journal of medical virology·2026
Same author

SIRT3-Mediated Mitochondrial Regulation and Driver Tissues in Systemic Aging.

Genes·2025
Same author

Diminished DNA binding affinity of DMRT1 caused by heterozygous DM domain mutations is a cause of male infertility.

Human molecular genetics·2025
Same author

Sirtuin 3 drives sex-specific responses to age-related changes in mouse embryonic fibroblasts.

Mechanisms of ageing and development·2024
Same author

Diagnosis of Two Unrelated Syndromes of Prader-Willi and Calpainopathy: Insight from Trio Whole Genome Analysis and Isodisomy Mapping.

Genes·2024
Same author

Precision Oncology and Systemic Targeted Therapy in Pseudomyxoma Peritonei.

Clinical cancer research : an official journal of the American Association for Cancer Research·2024

Related Experiment Video

Updated: Mar 16, 2026

Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data
09:29

Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data

Published on: May 15, 2019

20.5K

msBiodat analysis tool, big data analysis for high-throughput experiments.

Pau M Muñoz-Torres1, Filip Rokć1, Robert Belužic1

  • 1Translational Medicine Group, Institut Rudjer Bošković, Division of Molecular Medicine, Bijenička Cesta 54, Zagreb, 10000 Croatia.

Biodata Mining
|August 23, 2016
PubMed
Summary
This summary is machine-generated.

Mass spectrometry generates large datasets, requiring efficient filtering for biological insights. The msBiodat Analysis Tool simplifies this process, enabling researchers to easily analyze proteomics data and identify relevant proteins.

Keywords:
BioinformaticsData analysisData miningHigh-throughput analysisMass spectrometryProteomics

More Related Videos

An Analytical Tool-box for Comprehensive Biochemical, Structural and Transcriptome Evaluation of Oral Biofilms Mediated by Mutans Streptococci
11:09

An Analytical Tool-box for Comprehensive Biochemical, Structural and Transcriptome Evaluation of Oral Biofilms Mediated by Mutans Streptococci

Published on: January 25, 2011

18.2K
Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens
09:14

Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens

Published on: June 28, 2018

7.6K

Related Experiment Videos

Last Updated: Mar 16, 2026

Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data
09:29

Using the Open-Source MALDI TOF-MS IDBac Pipeline for Analysis of Microbial Protein and Specialized Metabolite Data

Published on: May 15, 2019

20.5K
An Analytical Tool-box for Comprehensive Biochemical, Structural and Transcriptome Evaluation of Oral Biofilms Mediated by Mutans Streptococci
11:09

An Analytical Tool-box for Comprehensive Biochemical, Structural and Transcriptome Evaluation of Oral Biofilms Mediated by Mutans Streptococci

Published on: January 25, 2011

18.2K
Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens
09:14

Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens

Published on: June 28, 2018

7.6K

Area of Science:

  • Proteomics
  • Bioinformatics
  • Computational Biology

Background:

  • Mass spectrometry (MS) is a high-throughput technique yielding extensive biomolecular data, often presented as extensive protein lists.
  • Efficiently filtering this data is crucial for extracting biologically meaningful information.
  • Integrating experimental data with public databases enhances the accuracy of protein identification.

Purpose of the Study:

  • To introduce the msBiodat Analysis Tool, a web-based application designed for big data analysis in proteomics.
  • To provide researchers with a user-friendly interface for selecting relevant information from MS experiments.
  • To facilitate protein selection based on Gene Ontology annotations using various identifiers (Gene ID, Ensembl, UniProt).

Main Methods:

  • Development of a web-based application (msBiodat Analysis Tool).
  • Implementation of an intuitive graphical user interface for data analysis.
  • Integration of Gene Ontology annotation capabilities for protein filtering.

Main Results:

  • The msBiodat Analysis Tool offers researchers, regardless of programming expertise, efficient database querying capabilities.
  • The tool enables fast and accurate data screening through versatile and user-friendly complex query options.
  • Analysis results are delivered via email upon completion.

Conclusions:

  • The msBiodat Analysis Tool democratizes proteomics big data analysis.
  • Its user-friendly design and powerful querying features support efficient and accurate data screening.
  • The tool is freely accessible, promoting wider adoption in biological research.