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Updated: Mar 16, 2026

Isolation of Murine Peritoneal Macrophages to Carry Out Gene Expression Analysis Upon Toll-like Receptors Stimulation
Published on: April 29, 2015
MHC II+ resident peritoneal and pleural macrophages rely on IRF4 for development from circulating monocytes
Ki-Wook Kim1, Jesse W Williams1, Ya-Ting Wang1
1Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63110.
Abstract:
Peritoneal and pleural resident macrophages in the mouse share common features and in each compartment exist as two distinct subpopulations: F4/80(+) macrophages and MHC II(+) CD11c(+) macrophages. F4/80(+) macrophages derive from embryonic precursors, and their maintenance is controlled by Gata6. However, the origin and regulatory factors that maintain MHC II(+) macrophages remain unknown. Here, we show that the MHC II(+) macrophages arise postnatally from CCR2-dependent precursors that resemble monocytes. Monocytes continuously replenish this subset through adulthood. Gene expression analysis identified distinct surface markers like CD226 and revealed that the transcription factor IRF4 was selectively expressed in these macrophages relative to other organs. Monocytes first entered peritoneal or pleural cavities to become MHC II(+) cells that up-regulated CD226 and CD11c later as they continued to mature. In the absence of IRF4 or after administration of oral antibiotics, MHC II(+)CD226(-)CD11c(-) monocyte-derived cells accumulated in peritoneal and pleural cavities, but CD11c(+) CD226(+) macrophages were lost. Thus, MHC II(+) resident peritoneal and pleural macrophages are continuously replenished by blood monocytes recruited to the peritoneal and pleural cavities constitutively, starting after birth, where they require IRF4 and signals likely derived from the microbiome to fully differentiate.
Insights
Resident macrophages in mouse peritoneal and pleural cavities originate from monocytes. These cells require IRF4 and microbiome signals for full differentiation, with monocytes continuously replenishing the MHC II(+) subset.
Area of Science:
- Immunology
- Cell Biology
- Microbiome Research
Background:
- Peritoneal and pleural cavities harbor two resident macrophage subsets: F4/80(+) and MHC II(+) CD11c(+).
- F4/80(+) macrophages originate from embryonic precursors regulated by Gata6.
- The origin and maintenance mechanisms for MHC II(+) macrophages remain largely unknown.
Purpose of the Study:
- To elucidate the origin and regulatory factors of MHC II(+) resident macrophages in the peritoneal and pleural cavities.
- To investigate the role of monocytes and specific transcription factors in the maintenance of these macrophage populations.
Main Methods:
- Analysis of macrophage subpopulations using surface markers (F4/80, MHC II, CD11c, CD226).
- Investigated monocyte recruitment and differentiation pathways.
- Utilized gene expression analysis and transcription factor (IRF4) knockout models.
- Assessed the impact of oral antibiotics on macrophage populations.
Main Results:
- MHC II(+) macrophages arise postnatally from CCR2-dependent monocyte precursors.
- Blood monocytes continuously replenish this subset throughout adulthood.
- IRF4 is selectively expressed in these macrophages, and its absence leads to accumulation of immature MHC II(+)CD226(-)CD11c(-) cells and loss of mature CD11c(+) CD226(+) macrophages.
- Oral antibiotics disrupt the differentiation of MHC II(+) macrophages.
Conclusions:
- MHC II(+) resident peritoneal and pleural macrophages are continuously replenished by blood monocytes.
- This differentiation process requires the transcription factor IRF4 and signals potentially derived from the microbiome.
- Monocyte recruitment and subsequent differentiation are critical for maintaining the mature MHC II(+) macrophage population.
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