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Updated: Mar 15, 2026

Whole-mount Clearing and Staining of Arabidopsis Flower Organs and Siliques
Published on: April 12, 2018
Histological Analysis of the Arabidopsis Gynoecium and Ovules Using Chloral Hydrate Clearing and Differential
1Department of Plant and Microbial Biology, North Carolina State University, 2548 Thomas Hall, Raleigh, NC, 27695-7614, USA. rgfranks@ncsu.edu.
Abstract:
The use of chloral hydrate optical clearing paired with differential interference contrast microscopy allows the analysis of internal structures of developing plant organs without the need for paraffin embedding and sectioning. This approach is appropriate for the analysis of the developing gynoecium or seedpod of the flowering plant Arabidopsis thaliana and many other types of fixed plant material. Early stages of ovule development are observable with this approach.
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