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The emerging microduplication 3q13.31: Expanding the genotype-phenotype correlations of the reciprocal microdeletion
1Service de Cytogénétique, Centre Hospitalier Intercommunal de Poissy Saint-Germain-en-Laye, 10 rue du Champ Gaillard, F-78303 Poissy, France; EA7404-GIG, UFR des Sciences de la Santé Simone Veil, Université Paris Saclay, 2 avenue de la source de la Bièvre, F-78180 Montigny le Bretonneux, France.
Abstract:
Microdeletion and microduplication syndromes are well-known causes of developmental delay and/or malformations of differing severity. It was recently reported that a microdeletion at the 3q13.31 locus is associated with a new syndrome combining developmental delay, postnatal overgrowth and dysmorphic features. However, the reciprocal microduplication has only been described in a few case reports displaying some clinical features of the microdeletion syndrome. Here, we report on a female infant with a 3.34 Mb microduplication of the 3q13.2q13.31 region inherited from her mother. The infant presented with severe intellectual disability, learning difficulties, intrauterine and postnatal growth retardation and skeletal particularities but no dysmorphic traits. This microduplication encompassed the previously described shortest region of overlap, which contains five genes (DRD3, ZNF80, TIGIT, MIR568 and ZBTB20). We reviewed the phenotypes described in the literature on microduplications and in the well-characterized 3q13.31 microdeletion syndrome. In agreement with the literature data, DRD3 and ZBTB20 appear to be strong candidate genes for neurodevelopmental defects and growth retardation. Lastly, we consider the putative mechanism of this rearrangement, which may involve a particular kind of nonallelic homologous recombination of human endogenous retrovirus elements.
Insights
A 3q13.2q13.31 microduplication in an infant caused severe intellectual disability and growth issues. This finding highlights candidate genes DRD3 and ZBTB20 involved in neurodevelopmental and growth defects.
Area of Science:
- Genetics
- Developmental Biology
- Human Pathology
Background:
- Microdeletion and microduplication syndromes are recognized causes of developmental delay and congenital malformations.
- A recently identified 3q13.31 microdeletion syndrome presents with developmental delay, postnatal overgrowth, and dysmorphic features.
- The reciprocal microduplication at 3q13.31 has been less characterized, with limited case reports.
Observation:
- This study reports a female infant with a 3.34 Mb microduplication of the 3q13.2q13.31 region inherited from her mother.
- The infant exhibited severe intellectual disability, learning difficulties, intrauterine and postnatal growth retardation, and skeletal abnormalities, but no dysmorphic traits.
- The microduplication spans the shortest region of overlap, including genes DRD3, ZNF80, TIGIT, MIR568, and ZBTB20.
Findings:
- The observed phenotype in the infant aligns with known microduplication syndromes and the 3q13.31 microdeletion syndrome.
- DRD3 and ZBTB20 are identified as strong candidate genes contributing to the neurodevelopmental defects and growth retardation seen in this microduplication.
- The rearrangement mechanism may involve nonallelic homologous recombination mediated by human endogenous retrovirus elements.
Implications:
- This case expands the clinical understanding of 3q13.2q13.31 microduplications, particularly the absence of dysmorphic features in this instance.
- The identification of candidate genes provides insights into the genetic underpinnings of neurodevelopmental and growth disorders associated with this chromosomal region.
- Further research into the mechanisms of such rearrangements can aid in diagnosing and potentially managing these complex genetic conditions.
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