A class of k-modes algorithms for extracting knowledge structures from data
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Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
Debora de Chiusole1, Luca Stefanutti1, Andrea Spoto2
1FISPPA Department, University of Padua, Padova, Italy.
Abstract:
One of the most crucial issues in knowledge space theory is the construction of the so-called knowledge structures. In the present paper, a new data-driven procedure for large data sets is described, which overcomes some of the drawbacks of the already existing methods. The procedure, called k-states, is an incremental extension of the k-modes algorithm, which generates a sequence of locally optimal knowledge structures of increasing size, among which a "best" model is selected. The performance of k-states is compared to other two procedures in both a simulation study and an empirical application. In the former, k-states displays a better accuracy in reconstructing knowledge structures; in the latter, the structure extracted by k-states obtained a better fit.
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