Analyzing Microarray Data
Related Experiment Video
Updated: Feb 9, 2026

Manual Construction of a Tissue Microarray using the Tape Method and a Handheld Microarrayer
Published on: June 10, 2022
Abstract:
Because there is no widely used software for analyzing RNA-seq data that has a graphical user interface, this protocol provides an example of analyzing microarray data using Babelomics. This analysis entails performing quantile normalization and then detecting differentially expressed genes associated with the transgenesis of a human oncogene c-Myc in mice. Finally, hierarchical clustering is performed on the differentially expressed genes using the Cluster program, and the results are visualized using TreeView.
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