AML suppresses hematopoiesis by releasing exosomes that contain microRNAs targeting c-MYB
Noah I Hornick1, Ben Doron1, Sherif Abdelhamed1
1Department of Pediatrics, Oregon Health & Science University, Portland, OR 97239, USA. Pediatric Cancer Biology, Oregon Health & Science University, Portland, OR 97239, USA. Papé Family Pediatric Research Institute, Oregon Health & Science University, Portland, OR 97239, USA.
Abstract:
Exosomes are paracrine regulators of the tumor microenvironment and contain complex cargo. We previously reported that exosomes released from acute myeloid leukemia (AML) cells can suppress residual hematopoietic stem and progenitor cell (HSPC) function indirectly through stromal reprogramming of niche retention factors. We found that the systemic loss of hematopoietic function is also in part a consequence of AML exosome-directed microRNA (miRNA) trafficking to HSPCs. Exosomes isolated from cultured AML or the plasma from mice bearing AML xenografts exhibited enrichment of miR-150 and miR-155. HSPCs cocultured with either of these exosomes exhibited impaired clonogenicity, through the miR-150- and miR-155-mediated suppression of the translation of transcripts encoding c-MYB, a transcription factor involved in HSPC differentiation and proliferation. To discover additional miRNA targets, we captured miR-155 and its target transcripts by coimmunoprecipitation with an attenuated RNA-induced silencing complex (RISC)-trap, followed by high-throughput sequencing. This approach identified known and previously unknown miR-155 target transcripts. Integration of the miR-155 targets with information from the protein interaction database STRING revealed proteins indirectly affected by AML exosome-derived miRNA. Our findings indicate a direct effect of AML exosomes on HSPCs that, through a stroma-independent mechanism, compromises hematopoiesis. Furthermore, combining miRNA target data with protein-protein interaction data may be a broadly applicable strategy to define the effects of exosome-mediated trafficking of regulatory molecules within the tumor microenvironment.
Insights
Acute myeloid leukemia (AML) exosomes directly impair hematopoietic stem and progenitor cell (HSPC) function. These exosomes deliver microRNAs (miRNAs) that suppress c-MYB, compromising hematopoiesis independently of stromal cells.
Area of Science:
- Cancer Biology
- Hematopoiesis
- Extracellular Vesicles
Background:
- Exosomes regulate the tumor microenvironment and carry diverse cargo.
- Acute myeloid leukemia (AML) exosomes can suppress hematopoietic stem and progenitor cell (HSPC) function.
- AML exosome-mediated miRNA trafficking contributes to systemic hematopoietic dysfunction.
Purpose of the Study:
- To investigate the direct impact of AML exosomes on HSPC function.
- To identify specific microRNAs (miRNAs) within AML exosomes responsible for HSPC suppression.
- To elucidate the molecular mechanisms underlying AML exosome-mediated hematopoiesis impairment.
Main Methods:
- Isolation and characterization of exosomes from AML cells and plasma.
- Co-culture of HSPCs with AML exosomes.
- Quantification of miRNA enrichment (miR-150, miR-155) in exosomes.
- Assessment of HSPC clonogenicity and c-MYB translation suppression.
- RNA-induced silencing complex (RISC)-trap coimmunoprecipitation and high-throughput sequencing for miRNA target identification.
- Integration of miRNA targets with protein-protein interaction data (STRING).
Main Results:
- AML exosomes, particularly those enriched in miR-150 and miR-155, impair HSPC clonogenicity.
- miR-150 and miR-155 directly suppress c-MYB translation in HSPCs, affecting differentiation and proliferation.
- Novel miR-155 targets and indirectly affected proteins were identified.
- AML exosomes exert a direct, stroma-independent suppressive effect on hematopoiesis.
Conclusions:
- AML exosomes directly compromise HSPC function via miRNA-mediated c-MYB suppression.
- This mechanism contributes to the loss of hematopoietic function in AML.
- Combining miRNA target and protein-protein interaction data is a valuable strategy for understanding exosome-mediated effects in the tumor microenvironment.
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