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Updated: Mar 15, 2026

Probing for Mitochondrial Complex Activity in Human Embryonic Stem Cells
Published on: June 17, 2008
E2F1 Orchestrates Transcriptomics and Oxidative Metabolism in Wharton's Jelly-Derived Mesenchymal Stem Cells from
Peck Yean Tan1, Cheng Wei Chang1, Kaibo Duan2
1Singapore Institute for Clinical Sciences, Agency for Science Technology and Research (A*STAR), Singapore, Singapore.
Insights
Mesenchymal Stem Cells (MSCs) from small for gestational age (SGA) infants show reduced mitochondrial function. The E2F1-ELOVL2 pathway impacts oxidative metabolism and cellular homeostasis in SGA MSCs.
Area of Science:
- Cell Biology
- Metabolic Research
- Stem Cell Biology
Background:
- Wharton's jelly-derived Mesenchymal Stem Cells (MSCs) from intrauterine growth restriction newborns exhibit anabolic properties.
- Previous studies indicated insulin hypersensitivity in these MSCs.
Purpose of the Study:
- To investigate mitochondrial function in MSCs from small for gestational age (SGA) individuals.
- To identify molecular mechanisms underlying metabolic alterations in SGA MSCs.
- To explore the role of E2F1 and its downstream targets in SGA MSCs.
Main Methods:
- Isolation and characterization of MSCs from normally grown and SGA newborns.
- Mitochondrial oxygen consumption rate measurements.
- Next-generation sequencing for transcriptomic and epigenetic profiling.
- Analysis of transcription factor E2F1 and histone modifications (H3K27ac, H3K4me3).
- Investigation of the fatty acid elongase ELOVL2 and docosahexaenoic acid (DHA) synthesis.
Main Results:
- MSCs from SGA individuals displayed decreased mitochondrial oxygen consumption rates.
- E2F1 was identified as an over-expressed transcription factor in SGA MSCs, regulating oxidative metabolism.
- E2F1 was associated with activating histone marks (H3K27ac, H3K4me3) and differential gene expression.
- The E2F1-regulated gene ELOVL2, involved in DHA synthesis, was identified as a key player.
Conclusions:
- The E2F1-ELOVL2 pathway significantly influences oxidative metabolism in SGA MSCs.
- This pathway contributes to maintaining cellular metabolic homeostasis in the context of SGA.
- Findings provide insights into the molecular basis of metabolic dysfunction in SGA-derived MSCs.
Abstract:
Wharton's jelly-derived Mesenchymal Stem Cells (MSCs) isolated from newborns with intrauterine fetal growth restriction were previously shown to exert anabolic features including insulin hypersensitivity. Here, we extend these observations and demonstrate that MSCs from small for gestational age (SGA) individuals have decreased mitochondrial oxygen consumption rates. Comparing normally grown and SGA MSCs using next generation sequencing studies, we measured global transcriptomic and epigenetic profiles and identified E2F1 as an over-expressed transcription factor regulating oxidative metabolism in the SGA group. We further show that E2F1 regulates the differential transcriptome found in SGA derived MSCs and is associated with the activating histone marks H3K27ac and H3K4me3. One of the key genes regulated by E2F1 was found to be the fatty acid elongase ELOVL2, a gene involved in the endogenous synthesis of docosahexaenoic acid (DHA). Finally, we shed light on how the E2F1-ELOVL2 pathway may alter oxidative respiration in the SGA condition by contributing to the maintenance of cellular metabolic homeostasis.
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