Related Experiment Video
Updated: Mar 14, 2026

Generation of High Quality Chromatin Immunoprecipitation DNA Template for High-throughput Sequencing ChIP-seq
Published on: April 19, 2013
Identification of rare variants in KCTD13 at the schizophrenia risk locus 16p11.2
Franziska Degenhardt1, Barbara Heinemann, Jana Strohmaier
1aInstitute of Human Genetics bDepartment of Genomics, Life and Brain Center cDepartment of Psychiatry and Psychotherapy dDepartment of Clinical Chemistry and Clinical Pharmacology, University of Bonn, Bonn eDepartment of Psychiatry, Ludwig-Maximilians-University Munich fKbo Kliniken des Bezirks Oberbayern, Munich gDepartment of Genetic Epidemiology in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Heidelberg hDepartment of Psychiatry, University of Halle-Wittenberg, Halle iIsar Amper Klinikum München Ost, kbo, Haar jInstitute of Neuroscience and Medicine (INM-1), Structural and Functional Organisation of the Brain, Genomic Imaging, Research Centre Juelich, Juelich, Germany kFaculty of Science, Medicine & Health, University of Wollongong, Wollongong, Australia lDepartment of Biomedicine, Division of Medical Genetics, University Hospital Basel, University of Basel, Basel, Switzerland.
Abstract:
Duplications in 16p11.2 are a risk factor for schizophrenia (SCZ). Using genetically modified zebrafish, Golzio and colleagues identified KCTD13 within 16p11.2 as a major driver of the neuropsychiatric phenotype observed in humans. The aims of the present study were to explore the role of KCTD13 in the development of SCZ and to provide a more complete picture of the allelic architecture at this risk locus. The exons of KCTD13 were sequenced in 576 patients. The mutations c.6G>T and c.598G>A were identified in one patient each. Both mutations were predicted to be functionally relevant and were absent from the 1000 Genomes Project data and the Exome Variant Server. The mutation c.6G>T was predicted to abolish a potential transcription factor-binding site for specifity protein 1. Altered specifity protein 1 expression has been reported in SCZ patients compared with controls. Further studies in large cohorts are warranted to determine the relevance of the two identified mutations.
More Related Videos
Related Concept Videos
Comparing Copy Number Variations and SNPs
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Karyotyping
Single Nucleotide Polymorphisms-SNPs
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...

