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Measles virus genotypes circulating in India, 2011-2015.

Sunil R Vaidya1, Deepika T Chowdhury1

  • 1World Health Organization Accredited National Reference Laboratory for Measles and Rubella, National Institute of Virology [Indian Council of Medical Research], Pune, Maharashtra, India.

Journal of Medical Virology
|October 4, 2016
PubMed
Summary

India

Area of Science:

  • Virology
  • Genetics
  • Public Health

Background:

  • India's commitment to measles and rubella elimination necessitates understanding measles virus (MeV) genetic diversity.
  • Molecular characterization of MeV is crucial for effective control strategies.

Purpose of the Study:

  • To genetically characterize measles virus strains circulating in India over two decades.
  • To compare recent Indian MeV sequences with historical data and WHO reference sequences.
  • To inform the national immunization program for measles and rubella control.

Main Methods:

  • Nucleoprotein (N) gene sequencing and genotyping of MeV from suspected cases.
  • Analysis of sequences from throat swabs, urine specimens, and PCR products.
  • Comparison of Indian MeV strains (1996-2015) with global reference sequences.
Keywords:
Indiameasles virusmeasles virus genotyping

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Main Results:

  • Measles genotypes B3, D4, and D8 were predominantly detected across 19 Indian states and 3 Union Territories.
  • Genetic divergence within Indian strains of B3, D4, and D8 was low (0.3%-2.1%).
  • Divergence from WHO reference sequences for B3, D4, and D8 ranged from 1.8% to 2.6%.

Conclusions:

  • Genotyping confirmed the circulation of specific measles genotypes in India, providing essential data for public health interventions.
  • Continued molecular surveillance and genotyping are vital for achieving measles and rubella elimination goals.
  • The findings support the national immunization program's efforts in measles and rubella control.