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Updated: Mar 14, 2026

Pattern-Triggered Oxidative Burst and Seedling Growth Inhibition Assays in Arabidopsis thaliana
Published on: May 21, 2019
Dysfunction of Arabidopsis MACPF domain protein activates programmed cell death via tryptophan metabolism in
Satoshi Fukunaga1, Miho Sogame1, Masaki Hata1
1Graduate School of Agriculture, Kyoto University, Kyoto, Japan.
Abstract:
Plant immune responses triggered upon recognition of microbe-associated molecular patterns (MAMPs) typically restrict pathogen growth without a host cell death response. We isolated two Arabidopsis mutants, derived from accession Col-0, that activated cell death upon inoculation with nonadapted fungal pathogens. Notably, the mutants triggered cell death also when treated with bacterial MAMPs such as flg22. Positional cloning identified NSL1 (Necrotic Spotted Lesion 1) as a responsible gene for the phenotype of the two mutants, whereas nsl1 mutations of the accession No-0 resulted in necrotic lesion formation without pathogen inoculation. NSL1 encodes a protein of unknown function containing a putative membrane-attack complex/perforin (MACPF) domain. The application of flg22 increased salicylic acid (SA) accumulation in the nsl1 plants derived from Col-0, while depletion of isochorismate synthase 1 repressed flg22-inducible lesion formation, indicating that elevated SA is needed for the cell death response. nsl1 plants of Col-0 responded to flg22 treatment with an RBOHD-dependent oxidative burst, but this response was dispensable for the nsl1-dependent cell death. Surprisingly, loss-of-function mutations in PEN2, involved in the metabolism of tryptophan (Trp)-derived indole glucosinolates, suppressed the flg22-induced and nsl1-dependent cell death. Moreover, the increased accumulation of SA in the nsl1 plants was abrogated by blocking Trp-derived secondary metabolite biosynthesis, whereas the nsl1-dependent hyperaccumulation of PEN2-dependent compounds was unaffected when the SA biosynthesis pathway was blocked. Collectively, these findings suggest that MAMP-triggered immunity activates a genetically programmed cell death in the absence of the functional MACPF domain protein NSL1 via Trp-derived secondary metabolite-mediated activation of the SA pathway.
Insights
Plant immune responses can trigger programmed cell death via salicylic acid (SA) and tryptophan metabolites when the NSL1 protein is absent. This discovery sheds light on MAMP-triggered immunity and programmed cell death mechanisms in plants.
Area of Science:
- Plant immunity
- Molecular plant-microbe interactions
- Cell death pathways
Background:
- Plant immune responses to microbe-associated molecular patterns (MAMPs) usually prevent pathogen growth without causing host cell death.
- Mutants were identified in Arabidopsis thaliana that exhibit cell death upon MAMP treatment.
Purpose of the Study:
- To identify the genetic basis of MAMP-induced cell death in Arabidopsis.
- To elucidate the molecular mechanisms underlying this programmed cell death.
Main Methods:
- Isolation and genetic analysis of Arabidopsis mutants.
- Positional cloning to identify the responsible gene (NSL1).
- Biochemical assays to measure salicylic acid (SA) accumulation and oxidative burst.
- Genetic analysis involving mutations in PEN2 and isochorismate synthase 1.
Main Results:
- Mutations in NSL1 cause MAMP-inducible cell death, dependent on salicylic acid (SA) accumulation.
- The RBOHD-dependent oxidative burst is not required for this cell death.
- Loss-of-function mutations in PEN2 suppress MAMP-induced cell death.
- Tryptophan-derived secondary metabolites are crucial for SA-mediated cell death.
Conclusions:
- MAMP-triggered immunity can activate genetically programmed cell death in the absence of functional NSL1.
- This process involves tryptophan-derived secondary metabolites and salicylic acid (SA) pathway activation.
- NSL1, a protein with a MACPF domain, plays a role in regulating MAMP-triggered cell death.
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